| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g29411 | 6:7,864,739-7,866,838 | + | C1H6g22454 | CX6g041342 | LOC_Os06g16290 | Os06g0274200 | - | Detail |
| C2H6g08784 | 6:7,871,922-7,873,753 | + | C1H6g18150 | CX6g042085 | LOC_Os06g16300 | Os06g0274300 | - | Detail |
| C2H6g23301 | 6:7,884,256-7,892,276 | + | C1H6g11842 | CX6g042085 | LOC_Os06g16330 | Os06g0274500 | OsSERL2 | Detail |
| C2H6g18739 | 6:7,894,575-7,896,559 | - | C1H6g22322 | CX6g044203 | LOC_Os06g16350 | Os06g0274800 | - | Detail |
| C2H6g26801 | 6:7,902,080-7,903,897 | + | C1H6g28161 | CX6g043973 | LOC_Os06g16370 | Os06g0275000 | SE1, Se1(Lm, Lf, Rs, Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, Hd1/OsA, OsCCT21 | Detail |
| C2H6g08900 | 6:7,906,068-7,906,865 | - | C1H6g25706 | - | - | - | - | Detail |
| C2H6g26383 | 6:7,907,925-7,908,182 | - | C1H6g25706 | - | - | - | - | Detail |
| C2H6g04388 | 6:7,918,732-7,927,129 | + | C1H6g22180 | CX6g042350 | LOC_Os06g16390 | Os06g0275500 | CLF, OsSET24, SDG711, EZ1, OsCLF | Detail |
| C2H6g05369 | 6:7,928,735-7,942,153 | + | C1H6g11424 | CX6g043166 | LOC_Os06g16400 | Os06g0275600 | - | Detail |
| C2H6g15127 | 6:7,942,274-7,947,309 | - | C1H6g04853 | CX6g045943 | LOC_Os06g16410 | Os06g0275700 | - | Detail |
| C2H6g23432 | 6:7,966,579-7,969,484 | + | C1H6g01958 | CX6g044340 | LOC_Os06g16420 | Os06g0275800 | - | Detail |
| C2H6g19168 | 6:7,971,257-7,978,687 | + | C1H6g15789 | CX6g045397 | LOC_Os06g16430 | Os06g0275900 | - | Detail |
| C2H6g18561 | 6:7,996,540-7,999,087 | - | C1H6g25163 | CX6g044986 | LOC_Os06g16480 | - | - | Detail |
| C2H6g19122 | 6:8,079,153-8,080,276 | - | - | - | - | - | - | Detail |
| C2H6g04931 | 6:8,084,494-8,085,057 | + | - | CX6g044232 | - | - | - | Detail |
| C2H6g13388 | 6:8,092,233-8,094,811 | - | C1H6g04878 | CX6g042959 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| C2H6g03383 | 6:8,249,187-8,251,271 | - | C1H6g07720 | CX6g041915 | LOC_Os06g16960 | Os06g0281300 | - | Detail |
| C2H6g14158 | 6:8,254,913-8,270,740 | - | C1H6g18405 | CX6g045347 | LOC_Os06g16980 | Os06g0281400 | - | Detail |
| C2H6g29390 | 6:8,271,561-8,271,848 | - | C1H6g06414 | CX6g042329 | LOC_Os06g16990 | Os06g0281550 | - | Detail |
| C2H6g13653 | 6:8,275,391-8,277,642 | - | C1H6g17072 | CX6g042800 | LOC_Os06g17000 | Os06g0281800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045973 | 6:5,112,943-5,114,136 | - | C1H6g18914 | C2H6g03151 | LOC_Os06g11640 | Os06g0219800 | - | Detail |
| CX6g042118 | 6:5,116,039-5,116,989 | - | - | C2H6g17916 | LOC_Os06g11650 | Os06g0219900 | - | Detail |
| CX6g043958 | 6:5,120,069-5,121,055 | - | - | C2H6g04012 | LOC_Os06g11660 | Os06g0220000 | - | Detail |
| CX6g045636 | 6:5,132,000-5,132,965 | + | - | C2H6g12445 | LOC_Os06g11680 | Os06g0220200 | - | Detail |
| CX6g043580 | 6:5,138,267-5,139,208 | + | - | C2H6g21859 | LOC_Os06g11700 | Os06g0220300 | - | Detail |
| CX6g045266 | 6:5,146,073-5,147,724 | + | C1H6g03579 | C2H6g24300 | LOC_Os06g11720 | Os06g0220500 | - | Detail |
| CX6g044450 | 6:5,150,079-5,154,293 | - | C1H6g06003 | C2H6g07096 | LOC_Os06g11730 | Os06g0220600 | - | Detail |
| CX6g041505 | 6:5,164,928-5,166,263 | + | C1H6g12090 | C2H6g12923 | LOC_Os06g11740 | Os06g0220800 | - | Detail |
| CX6g042441 | 6:5,166,310-5,166,630 | + | C1H6g12090 | C2H6g12923 | LOC_Os06g11740 | Os06g0220800 | - | Detail |
| CX6g041931 | 6:5,174,685-5,174,966 | + | - | C2H6g07563 | LOC_Os06g11760 | Os06g0220900 | - | Detail |
| CX6g044637 | 6:5,181,062-5,182,185 | + | C1H6g18231 | C2H6g06859 | LOC_Os06g11780 | Os06g0221000 | Os2R_MYB64 | Detail |
| CX6g043968 | 6:5,184,885-5,185,445 | - | C1H6g12182 | C2H6g09044 | LOC_Os06g14070 | Os06g0125200 | OsFLZ18 | Detail |
| CX6g043620 | 6:5,186,376-5,189,951 | - | C1H6g30010 | C2H6g11727 | LOC_Os06g11790 | Os06g0221100 | - | Detail |
| CX6g041413 | 6:5,192,619-5,195,303 | + | C1H6g19489 | C2H6g09527 | LOC_Os06g11800 | Os06g0221200 | OsAnn5 | Detail |
| CX6g043192 | 6:5,195,777-5,196,292 | - | C1H2g26243 | C2H6g15099 | LOC_Os06g11812 | Os06g0221300 | - | Detail |
| CX6g043020 | 6:5,196,827-5,197,882 | - | C1H2g14717 | - | - | - | - | Detail |
| CX6g045872 | 6:5,208,385-5,210,629 | - | C1H6g08428 | C2H6g07173 | LOC_Os06g11840 | Os06g0222100 | - | Detail |
| CX6g043696 | 6:5,216,356-5,216,815 | - | - | - | - | - | - | Detail |
| CX6g044067 | 6:5,226,141-5,226,502 | - | - | - | - | Os06g0606100 | - | Detail |
| CX6g041802 | 6:5,228,853-5,229,212 | - | - | C2H6g14078 | LOC_Os06g11850 | - | - | Detail |