| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10070 | 6:1,206,892-1,210,446 | - | C2H6g24358 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C1H6g21299 | 6:1,232,098-1,234,449 | - | C2H6g09752 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C1H6g23000 | 6:1,236,154-1,241,180 | - | C2H6g08599 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C1H6g17422 | 6:1,254,523-1,257,080 | - | C2H6g25055 | CX6g045866 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C1H6g23540 | 6:1,260,805-1,265,679 | + | C2H6g03148 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C1H6g19109 | 6:1,272,128-1,273,395 | - | C2H6g23474 | - | - | Os06g0320850 | - | Detail |
| C1H6g16194 | 6:1,274,268-1,275,107 | - | - | - | - | - | - | Detail |
| C1H6g09083 | 6:1,281,026-1,281,307 | - | C2H6g03555 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C1H6g07345 | 6:1,299,546-1,300,385 | + | C2H6g05959 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g21882 | 6:1,301,814-1,305,405 | - | C2H6g30353 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C1H6g02027 | 6:1,309,163-1,312,823 | + | C2H6g15004 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C1H6g14754 | 6:1,313,392-1,315,091 | - | C2H6g06475 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C1H6g07407 | 6:1,316,219-1,319,474 | - | C2H6g13486 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C1H6g30767 | 6:1,322,518-1,324,925 | - | C2H6g29611 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| C1H6g02287 | 6:1,340,470-1,345,102 | - | C2H6g16063 | CX6g042141 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g27088 | 6:1,345,304-1,346,406 | - | C2H6g07865 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g08483 | 6:1,348,819-1,352,221 | - | C2H6g27381 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C1H6g12134 | 6:1,353,149-1,356,053 | - | C2H6g21512 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C1H6g22115 | 6:1,358,111-1,361,335 | + | C2H6g22079 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C1H6g09734 | 6:1,366,419-1,369,745 | - | C2H6g05948 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042229 | 6:4,760,457-4,760,813 | + | - | C2H6g28046 | LOC_Os06g11060 | Os06g0213900 | - | Detail |
| CX6g043031 | 6:4,763,922-4,767,248 | + | C1H6g27911 | C2H6g04205 | LOC_Os06g11070 | Os06g0214100 | - | Detail |
| CX6g041598 | 6:4,769,357-4,770,253 | - | - | C2H6g07546 | - | Os06g0328900 | - | Detail |
| CX6g045520 | 6:4,772,679-4,773,650 | + | C1H6g25394 | C2H6g30210 | LOC_Os06g11090 | Os06g0214300 | - | Detail |
| CX6g041683 | 6:4,791,472-4,792,467 | + | C1H6g25394 | C2H6g16688 | LOC_Os06g11130 | Os06g0214800 | - | Detail |
| CX6g045602 | 6:4,793,380-4,800,382 | - | C1H6g25394 | C2H6g24676 | LOC_Os06g11135 | Os06g0214850 | - | Detail |
| CX6g043463 | 6:4,802,795-4,802,965 | + | - | - | - | - | - | Detail |
| CX6g042269 | 6:4,805,635-4,806,879 | + | - | C2H6g01557 | LOC_Os06g11150 | Os06g0215100 | - | Detail |
| CX6g041644 | 6:4,812,424-4,815,696 | - | C1H6g15327 | C2H6g13237 | LOC_Os06g11170 | Os06g0215200 | - | Detail |
| CX6g041530 | 6:4,817,092-4,824,628 | - | C1H6g11886 | C2H6g12848 | LOC_Os06g11180 | Os06g0215300 | - | Detail |
| CX6g041872 | 6:4,826,759-4,831,539 | - | C1H6g04214 | C2H6g10401 | LOC_Os06g11190 | Os06g0215400 | - | Detail |
| CX6g044875 | 6:4,887,897-4,889,339 | - | C1H6g22566 | C2H6g03509 | LOC_Os06g11300 | Os06g0216400 | - | Detail |
| CX6g042990 | 6:4,892,268-4,892,915 | + | - | - | LOC_Os06g13620 | - | - | Detail |
| CX6g043898 | 6:4,893,498-4,894,920 | - | - | C2H6g08437 | LOC_Os06g13630 | - | - | Detail |
| CX6g041766 | 6:4,900,412-4,901,300 | - | C1H6g13647 | C2H6g21771 | LOC_Os06g11310 | Os06g0216700 | - | Detail |
| CX6g045112 | 6:4,903,792-4,908,795 | - | C1H6g11372 | C2H6g18048 | LOC_Os06g11320 | Os06g0216800 | - | Detail |
| CX6g045735 | 6:4,911,837-4,912,151 | + | - | - | - | Os06g0216966 | - | Detail |
| CX6g041344 | 6:4,921,490-4,934,982 | - | C1H6g00888 | C2H6g03789 | LOC_Os06g11330 | Os06g0217300 | OsMADS55 | Detail |
| CX6g045941 | 6:4,946,550-4,949,541 | - | C1H6g18685 | C2H6g23128 | LOC_Os06g11370 | Os06g0217500 | - | Detail |
| CX6g045380 | 6:4,951,843-4,967,714 | - | C1H6g24377 | C2H6g26845 | LOC_Os06g11380 | Os06g0217600 | - | Detail |