| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g10870 | 5:2,764,057-2,769,694 | - | C1H5g01429 | CX5g037873 | LOC_Os05g06350 | Os05g0155601 | Imp a1b, Imp3 | Detail |
| C2H5g10571 | 5:2,772,256-2,777,648 | + | C1H5g05444 | CX5g036886 | LOC_Os05g06360 | Os05g0155700 | - | Detail |
| C2H5g29906 | 5:2,783,261-2,784,652 | + | C1H5g08048 | CX5g040299 | LOC_Os05g06380 | Os05g0155800 | - | Detail |
| C2H5g30592 | 5:2,792,434-2,793,738 | + | C1H5g08048 | CX5g040434 | LOC_Os05g06380 | Os05g0155800 | - | Detail |
| C2H5g22135 | 5:2,799,478-2,802,268 | + | C1H5g20577 | CX5g040720 | LOC_Os05g06420 | Os05g0156200 | - | Detail |
| C2H5g24185 | 5:2,804,420-2,807,812 | - | C1H5g09510 | CX5g039738 | LOC_Os05g06430 | Os05g0156300 | - | Detail |
| C2H5g26310 | 5:2,815,955-2,820,288 | + | C1H5g09608 | CX5g036765 | LOC_Os05g06440 | Os05g0156500 | - | Detail |
| C2H5g19277 | 5:2,820,449-2,825,519 | - | C1H5g14046 | CX5g037146 | LOC_Os05g06450 | Os05g0156600 | - | Detail |
| C2H5g05970 | 5:2,827,521-2,834,014 | - | C1H5g24964 | CX5g038153 | LOC_Os05g06460 | Os05g0156700 | OsLPD1 | Detail |
| C2H5g20269 | 5:2,838,758-2,850,343 | + | C1H5g24978 | CX5g038021 | LOC_Os05g06470 | Os05g0156800 | - | Detail |
| C2H5g09414 | 5:2,851,034-2,855,117 | - | C1H5g24292 | CX5g037368 | LOC_Os05g06480 | Os05g0156900 | Chalk5 | Detail |
| C2H5g11758 | 5:2,860,791-2,863,087 | - | C1H5g00102 | CX5g037609 | LOC_Os05g06500 | Os05g0157200 | - | Detail |
| C2H5g06394 | 5:2,864,710-2,868,737 | - | C1H5g31378 | CX5g036870 | LOC_Os05g06510 | Os05g0157300 | - | Detail |
| C2H5g00238 | 5:2,873,275-2,874,014 | + | C1H5g16317 | CX5g039713 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| C2H5g01907 | 5:2,874,310-2,876,762 | + | C1H5g16317 | CX5g039713 | LOC_Os05g06630 | Os05g0158200 | - | Detail |
| C2H5g29731 | 5:2,882,126-2,886,279 | + | C1H5g16317 | CX5g040970 | LOC_Os05g06540 | Os05g0157600 | - | Detail |
| C2H5g15119 | 5:2,938,106-2,941,501 | + | C1H5g16317 | CX5g038380 | LOC_Os05g06630 | Os05g0158200 | - | Detail |
| C2H5g22849 | 5:2,947,907-2,951,658 | + | C1H5g05673 | CX5g039850 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| C2H5g05727 | 5:2,952,931-2,957,012 | - | C1H5g28371 | CX5g037102 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| C2H5g19140 | 5:2,973,259-2,979,155 | + | C1H5g06427 | CX5g037159 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043992 | 6:4,604,517-4,604,681 | + | - | - | - | Os01g0612350 | - | Detail |
| CX6g045597 | 6:4,609,171-4,609,863 | + | C1H6g22658 | C2H6g03873 | LOC_Os06g10780 | Os06g0166400 | - | Detail |
| CX6g045137 | 6:4,615,449-4,617,572 | - | C1H6g00451 | C2H6g16171 | LOC_Os06g10790 | Os06g0210400 | - | Detail |
| CX6g045103 | 6:4,618,976-4,619,971 | - | C1H6g30354 | C2H6g21763 | LOC_Os06g10800 | Os06g0271600 | - | Detail |
| CX6g042263 | 6:4,620,094-4,624,152 | + | C1H6g28588 | C2H6g14969 | LOC_Os06g10810 | Os06g0210500 | OsMPT3;2 | Detail |
| CX6g045506 | 6:4,625,277-4,625,918 | + | C1H6g11807 | C2H6g10890 | LOC_Os06g10820 | Os06g0193400 | - | Detail |
| CX6g045353 | 6:4,628,579-4,628,728 | + | - | - | - | Os01g0728000 | - | Detail |
| CX6g043349 | 6:4,639,749-4,642,556 | + | C1H6g13425 | C2H6g23532 | LOC_Os06g10850 | Os06g0210900 | - | Detail |
| CX6g042936 | 6:4,643,508-4,644,478 | + | C1H6g17556 | C2H6g27273 | LOC_Os06g10860 | Os06g0137650 | - | Detail |
| CX6g044378 | 6:4,646,562-4,647,419 | - | - | C2H6g14016 | LOC_Os06g10870 | Os06g0199000 | - | Detail |
| CX6g045664 | 6:4,657,016-4,661,386 | + | C1H6g02776 | C2H6g15173 | LOC_Os06g10880 | Os06g0211200 | - | Detail |
| CX6g044980 | 6:4,664,842-4,665,774 | + | C1H6g25517 | C2H6g18394 | LOC_Os06g10890 | Os06g0211300 | - | Detail |
| CX6g041606 | 6:4,683,596-4,685,901 | - | C1H6g03132 | C2H6g26839 | LOC_Os06g10930 | Os06g0212100 | - | Detail |
| CX6g042836 | 6:4,690,137-4,692,094 | - | C1H6g29058 | C2H6g02416 | LOC_Os06g10950 | Os06g0212300 | - | Detail |
| CX6g042891 | 6:4,707,108-4,708,754 | - | C1H6g29058 | C2H6g10456 | LOC_Os06g10980 | Os06g0212600 | - | Detail |
| CX6g041856 | 6:4,713,980-4,715,743 | - | C1H6g16649 | C2H6g13451 | LOC_Os06g10990 | Os06g0212900 | - | Detail |
| CX6g044769 | 6:4,725,900-4,727,471 | - | C1H6g08719 | C2H6g17342 | - | - | - | Detail |
| CX6g043284 | 6:4,734,636-4,739,024 | - | C1H6g08802 | C2H6g15327 | LOC_Os06g11020 | Os06g0213200 | - | Detail |
| CX6g041750 | 6:4,739,642-4,739,941 | - | - | C2H6g21606 | LOC_Os06g11030 | - | - | Detail |
| CX6g045440 | 6:4,745,223-4,749,709 | - | C1H6g26256 | C2H6g18821 | LOC_Os06g11040 | Os06g0213400 | - | Detail |