| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03677 | 1:5,228,990-5,233,936 | - | C2H1g07094 | CX1g001003 | LOC_Os01g11120 | Os01g0209400 | - | Detail |
| C1H1g12202 | 1:5,240,740-5,247,086 | - | C2H1g19634 | CX1g000194 | LOC_Os01g11130 | Os01g0209500 | - | Detail |
| C1H1g22199 | 1:5,260,169-5,263,608 | - | C2H1g00003 | CX1g004422 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| C1H1g04985 | 1:5,275,210-5,277,507 | - | C2H1g04035 | CX1g004758 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| C1H1g27615 | 1:5,290,703-5,291,914 | + | C2H1g10978 | CX1g001982 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| C1H1g05366 | 1:5,292,191-5,294,314 | - | C2H1g29549 | CX1g004173 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| C1H1g26696 | 1:5,295,196-5,296,298 | - | - | - | LOC_Os01g11230 | - | - | Detail |
| C1H1g15458 | 1:5,308,574-5,312,697 | + | C2H1g02275 | - | - | Os01g0210750 | - | Detail |
| C1H1g12886 | 1:5,309,605-5,313,470 | - | C2H1g05349 | CX1g002610 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| C1H1g30027 | 1:5,316,751-5,321,347 | + | C2H1g07302 | CX1g004526 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| C1H1g07906 | 1:5,367,183-5,368,508 | - | C2H1g05400 | - | LOC_Os01g11350 | Os01g0211800 | - | Detail |
| C1H1g25024 | 1:5,381,875-5,394,457 | + | C2H1g30364 | CX1g006413 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| C1H1g24516 | 1:5,402,401-5,407,612 | + | C2H1g07400 | CX1g004990 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| C1H1g10197 | 1:5,408,201-5,409,925 | - | C2H1g07852 | CX1g007192 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| C1H1g30544 | 1:5,417,884-5,418,288 | - | - | - | - | - | - | Detail |
| C1H1g26340 | 1:5,433,082-5,438,674 | - | C2H1g19922 | CX1g001182 | LOC_Os01g11460 | Os01g0212700 | - | Detail |
| C1H1g22295 | 1:5,441,280-5,441,984 | - | C2H1g00533 | CX1g001182 | LOC_Os01g11490 | Os01g0213100 | - | Detail |
| C1H1g24050 | 1:5,445,123-5,445,803 | - | C2H1g20430 | CX1g001182 | LOC_Os01g11500 | Os01g0213100 | - | Detail |
| C1H1g28036 | 1:5,473,048-5,474,935 | - | C2H1g27187 | CX1g004394 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |
| C1H1g17492 | 1:5,497,154-5,499,229 | - | C2H1g17634 | CX1g003866 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044515 | 6:4,457,816-4,457,986 | + | - | - | - | - | - | Detail |
| CX6g041368 | 6:4,463,789-4,464,025 | + | C1H6g15402 | C2H6g22518 | - | Os06g0207950 | - | Detail |
| CX6g041688 | 6:4,474,603-4,477,688 | - | C1H6g02323 | C2H6g27450 | LOC_Os06g10600 | Os06g0208100 | Roc8 | Detail |
| CX6g042182 | 6:4,495,621-4,496,232 | + | C1H6g05902 | C2H6g30430 | LOC_Os06g10610 | Os06g0208200 | - | Detail |
| CX6g042180 | 6:4,496,995-4,503,744 | - | C1H6g24925 | C2H6g01432 | LOC_Os06g10620 | Os06g0208300 | OsSPT5-1 | Detail |
| CX6g045874 | 6:4,511,502-4,511,651 | - | - | - | - | - | - | Detail |
| CX6g045182 | 6:4,511,852-4,512,040 | + | - | - | - | - | - | Detail |
| CX6g043654 | 6:4,526,541-4,528,568 | - | C1H6g18139 | C2H6g16759 | LOC_Os06g10740 | Os02g0521366 | - | Detail |
| CX6g043421 | 6:4,532,064-4,535,772 | + | C1H6g14849 | C2H6g17419 | LOC_Os06g10650 | Os06g0208700 | - | Detail |
| CX6g043324 | 6:4,537,034-4,539,862 | + | C1H6g23556 | C2H6g13350 | LOC_Os06g10660 | Os06g0208800 | LYP6, Os-LYP6, OsLYP6 | Detail |
| CX6g041689 | 6:4,541,574-4,541,942 | - | - | - | - | - | - | Detail |
| CX6g045918 | 6:4,546,167-4,547,537 | + | C1H6g25354 | C2H6g27092 | LOC_Os06g10670 | Os06g0209100 | - | Detail |
| CX6g043196 | 6:4,553,279-4,562,045 | - | C1H6g29444 | C2H6g18588 | LOC_Os06g10690 | Os06g0209300 | - | Detail |
| CX6g042745 | 6:4,563,647-4,563,979 | - | - | C2H6g30171 | LOC_Os06g10700 | Os06g0209400 | - | Detail |
| CX6g042078 | 6:4,565,486-4,566,388 | + | - | C2H6g20867 | LOC_Os06g10710 | Os02g0768700 | - | Detail |
| CX6g044385 | 6:4,572,810-4,573,037 | + | - | - | - | - | - | Detail |
| CX6g045030 | 6:4,583,551-4,586,074 | + | C1H6g09344 | C2H6g20741 | LOC_Os06g10750 | Os06g0210000 | - | Detail |
| CX6g044963 | 6:4,589,317-4,591,630 | + | C1H6g15422 | C2H6g09939 | LOC_Os06g10760 | Os06g0210100 | - | Detail |
| CX6g044316 | 6:4,592,715-4,593,532 | - | C1H7g20360 | C2H7g10129 | LOC_Os04g27320 | - | - | Detail |
| CX6g041985 | 6:4,600,682-4,603,926 | + | C1H6g05633 | C2H6g00045 | LOC_Os06g10770 | Os06g0210200 | - | Detail |