| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13326 | 2:3,588,053-3,590,715 | - | C1H2g08053 | CX2g020425 | LOC_Os02g07920 | Os02g0175900 | - | Detail |
| C2H2g22576 | 2:3,592,545-3,592,920 | - | - | - | - | - | - | Detail |
| C2H2g12429 | 2:3,596,184-3,596,852 | - | C1H2g09013 | CX2g024012 | LOC_Os02g07930 | Os02g0176000 | - | Detail |
| C2H2g10282 | 2:3,613,439-3,623,803 | - | C1H2g28078 | CX2g024713 | LOC_Os02g07960 | Os02g0176100 | - | Detail |
| C2H2g27167 | 2:3,638,922-3,640,311 | - | C1H2g25304 | CX2g023070 | LOC_Os02g07980 | Os02g0176400 | - | Detail |
| C2H2g16155 | 2:3,651,851-3,665,134 | - | C1H2g10513 | CX2g023980 | LOC_Os02g08010 | Os02g0176700 | OsACA9 | Detail |
| C2H2g12184 | 2:3,672,081-3,672,663 | - | - | - | - | - | - | Detail |
| C2H2g22723 | 2:3,680,501-3,683,234 | - | C1H2g25148 | CX2g022339 | LOC_Os02g08030 | Os02g0176900 | - | Detail |
| C2H2g01390 | 2:3,700,208-3,703,788 | + | C1H2g16100 | CX2g022848 | LOC_Os02g08070 | Os02g0177300 | - | Detail |
| C2H2g10970 | 2:3,712,383-3,716,534 | - | C1H2g15920 | CX2g024774 | LOC_Os02g08080 | Os02g0177400 | - | Detail |
| C2H2g24704 | 2:3,717,510-3,720,546 | - | C1H2g27198 | CX2g020793 | LOC_Os02g08090 | Os02g0177500 | - | Detail |
| C2H2g12631 | 2:3,726,595-3,731,994 | + | C1H2g08951 | CX2g022957 | LOC_Os02g08100 | Os02g0177600 | 4CL3, Os4CL3 | Detail |
| C2H2g27738 | 2:3,733,013-3,734,807 | - | C1H2g09011 | CX2g022286 | LOC_Os02g08110 | Os02g0177700 | - | Detail |
| C2H2g12927 | 2:3,743,297-3,749,181 | - | C1H2g27287 | CX2g022124 | LOC_Os02g08120 | Os02g0177800 | - | Detail |
| C2H2g07746 | 2:3,752,307-3,757,112 | + | C1H2g28459 | CX2g019995 | LOC_Os02g08130 | Os02g0177900 | - | Detail |
| C2H2g14463 | 2:3,757,065-3,760,131 | - | C1H2g30647 | CX2g024854 | LOC_Os02g08140 | Os02g0178000 | - | Detail |
| C2H2g17770 | 2:3,765,081-3,766,445 | + | C1H2g28373 | CX2g023396 | LOC_Os02g08150 | Os02g0178100 | - | Detail |
| C2H2g04824 | 2:3,768,438-3,772,203 | + | C1H2g21750 | CX2g020766 | LOC_Os02g08160 | Os02g0178200 | - | Detail |
| C2H2g23387 | 2:3,780,280-3,782,362 | + | C1H2g28628 | CX2g023441 | LOC_Os02g08180 | Os02g0178400 | - | Detail |
| C2H2g26582 | 2:3,782,576-3,786,188 | - | C1H2g01304 | CX2g023345 | LOC_Os02g08190 | Os02g0178500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002938 | 1:24,288,260-24,291,720 | + | C1H1g07341 | C2H1g27855 | LOC_Os01g47700 | Os01g0378100 | - | Detail |
| CX1g001501 | 1:24,298,214-24,302,061 | - | C1H1g07732 | C2H1g30150 | LOC_Os01g47710 | Os01g0667400 | DWT1, OsWOX7, Os WOX7, WOX7, OsWOX9A | Detail |
| CX1g004210 | 1:24,308,191-24,308,340 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g006409 | 1:24,314,279-24,314,434 | - | - | - | - | - | - | Detail |
| CX1g007033 | 1:24,316,765-24,317,833 | + | C1H1g06325 | C2H1g17608 | LOC_Os01g47730 | Os01g0667600 | - | Detail |
| CX1g001948 | 1:24,318,640-24,322,465 | - | C1H1g06521 | C2H1g29615 | LOC_Os01g47740 | Os01g0667700 | - | Detail |
| CX1g005519 | 1:24,329,139-24,329,477 | + | - | - | LOC_Os01g47745 | Os01g0667750 | - | Detail |
| CX1g002743 | 1:24,332,724-24,333,347 | - | C1H5g29642 | C2H5g04888 | LOC_Os01g47750 | Os01g0667800 | - | Detail |
| CX1g006296 | 1:24,350,563-24,351,381 | - | - | - | LOC_Os01g46910 | Os01g0658300 | - | Detail |
| CX1g003489 | 1:24,353,690-24,354,115 | - | C1H1g15115 | C2H5g19965 | LOC_Os01g47760 | Os01g0667900 | GRX6, OsGRX6 | Detail |
| CX1g002850 | 1:24,373,374-24,375,121 | + | C1H1g13825 | C2H1g11333 | LOC_Os01g47770 | Os01g0668000 | - | Detail |
| CX1g001503 | 1:24,378,033-24,378,776 | - | C1H1g21585 | C2H5g22988 | LOC_Os01g47780 | Os01g0668100 | - | Detail |
| CX1g000496 | 1:24,384,420-24,393,212 | + | C1H1g02552 | C2H1g26438 | LOC_Os01g47800 | Os01g0668300 | - | Detail |
| CX1g006814 | 1:24,456,736-24,463,451 | - | C1H1g22206 | C2H1g04896 | LOC_Os01g48060 | Os01g0670800 | OsARF2, OsETT2, ARF3a | Detail |
| CX1g002497 | 1:24,477,916-24,478,420 | + | - | - | - | Os11g0695975 | - | Detail |
| CX1g006501 | 1:24,486,571-24,486,720 | - | - | - | - | - | - | Detail |
| CX1g006626 | 1:24,490,196-24,494,470 | - | C1H1g00357 | C2H1g18055 | LOC_Os01g48130 | Os01g0672100 | - | Detail |
| CX1g000322 | 1:24,502,884-24,504,356 | - | C1H1g11272 | C2H1g22636 | LOC_Os01g48140 | Os01g0672166 | - | Detail |
| CX1g005190 | 1:24,512,874-24,528,645 | + | C1H1g22608 | C2H1g23590 | LOC_Os01g48170 | Os01g0672201 | - | Detail |
| CX1g001676 | 1:24,532,314-24,535,123 | + | C1H1g30509 | C2H1g10699 | LOC_Os01g48190 | Os01g0672400 | - | Detail |