| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19573 | 3:11,487,898-11,492,875 | + | C2H3g07847 | CX3g027432 | LOC_Os03g22320 | Os03g0343300 | - | Detail |
| C1H3g04598 | 3:11,494,274-11,497,969 | + | C2H3g27542 | CX3g030144 | LOC_Os03g22330 | Os03g0343400 | - | Detail |
| C1H3g18164 | 3:11,498,563-11,500,164 | - | C2H3g22833 | CX3g027840 | LOC_Os03g22340 | Os03g0343500 | - | Detail |
| C1H3g07503 | 3:11,504,257-11,507,167 | + | C2H3g27042 | CX3g028939 | LOC_Os03g22350 | Os03g0343700 | - | Detail |
| C1H3g24513 | 3:11,517,032-11,521,741 | + | C2H3g07184 | CX3g027723 | LOC_Os03g22380 | Os03g0344100 | OsSR32 | Detail |
| C1H3g14886 | 3:11,525,586-11,527,656 | - | C2H3g20782 | CX3g030547 | LOC_Os03g22390 | Os03g0305400 | OsUSP3 | Detail |
| C1H3g05435 | 3:11,529,322-11,534,415 | - | C2H3g20681 | CX3g030391 | LOC_Os03g22400 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| C1H3g07428 | 3:11,543,114-11,554,022 | - | C2H3g04996 | CX3g028417 | LOC_Os03g22420 | Os03g0344700 | - | Detail |
| C1H3g00349 | 3:11,559,520-11,563,973 | - | C2H3g03468 | CX3g028111 | LOC_Os03g22430 | Os03g0344900 | - | Detail |
| C1H3g20152 | 3:11,568,909-11,572,969 | - | C2H3g18234 | CX3g028584 | LOC_Os03g22450 | Os03g0345100 | OsRad9, OsRad9.2 | Detail |
| C1H3g20510 | 3:11,573,075-11,574,720 | + | C2H3g01674 | CX3g029736 | LOC_Os03g46490 | Os03g0345200 | - | Detail |
| C1H3g29872 | 3:11,576,589-11,580,652 | - | C2H3g02585 | CX3g029517 | LOC_Os03g22470 | Os03g0345300 | - | Detail |
| C1H3g23882 | 3:11,596,569-11,598,472 | - | C2H3g21914 | CX3g027384 | LOC_Os03g22490 | Os03g0345700 | - | Detail |
| C1H3g04062 | 3:11,634,787-11,635,116 | - | C2H3g16014 | CX3g030360 | LOC_Os03g22510 | Os03g0346200 | ACE1, OsSIN | Detail |
| C1H3g13519 | 3:11,652,610-11,659,058 | + | C2H3g21311 | CX3g029712 | LOC_Os03g22540 | Os03g0346700 | - | Detail |
| C1H3g09102 | 3:11,661,085-11,666,993 | + | C2H3g14665 | CX3g029457 | LOC_Os03g22550 | Os03g0346800 | - | Detail |
| C1H3g03973 | 3:11,668,777-11,674,387 | - | C2H3g24882 | CX3g027020 | LOC_Os03g22560 | Os03g0346900 | - | Detail |
| C1H3g06261 | 3:11,684,740-11,696,373 | + | C2H3g28349 | CX3g030324 | LOC_Os03g22570 | Os03g0347200 | - | Detail |
| C1H3g24032 | 3:11,698,741-11,710,290 | - | C2H3g09980 | CX3g026560 | LOC_Os03g22580 | Os03g0347300 | - | Detail |
| C1H3g06908 | 3:11,714,387-11,716,738 | - | C2H3g05670 | CX3g028295 | LOC_Os03g22590 | Os03g0347500 | OsSWEET12 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002938 | 1:24,288,260-24,291,720 | + | C1H1g07341 | C2H1g27855 | LOC_Os01g47700 | Os01g0378100 | - | Detail |
| CX1g001501 | 1:24,298,214-24,302,061 | - | C1H1g07732 | C2H1g30150 | LOC_Os01g47710 | Os01g0667400 | DWT1, OsWOX7, Os WOX7, WOX7, OsWOX9A | Detail |
| CX1g004210 | 1:24,308,191-24,308,340 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g006409 | 1:24,314,279-24,314,434 | - | - | - | - | - | - | Detail |
| CX1g007033 | 1:24,316,765-24,317,833 | + | C1H1g06325 | C2H1g17608 | LOC_Os01g47730 | Os01g0667600 | - | Detail |
| CX1g001948 | 1:24,318,640-24,322,465 | - | C1H1g06521 | C2H1g29615 | LOC_Os01g47740 | Os01g0667700 | - | Detail |
| CX1g005519 | 1:24,329,139-24,329,477 | + | - | - | LOC_Os01g47745 | Os01g0667750 | - | Detail |
| CX1g002743 | 1:24,332,724-24,333,347 | - | C1H5g29642 | C2H5g04888 | LOC_Os01g47750 | Os01g0667800 | - | Detail |
| CX1g006296 | 1:24,350,563-24,351,381 | - | - | - | LOC_Os01g46910 | Os01g0658300 | - | Detail |
| CX1g003489 | 1:24,353,690-24,354,115 | - | C1H1g15115 | C2H5g19965 | LOC_Os01g47760 | Os01g0667900 | GRX6, OsGRX6 | Detail |
| CX1g002850 | 1:24,373,374-24,375,121 | + | C1H1g13825 | C2H1g11333 | LOC_Os01g47770 | Os01g0668000 | - | Detail |
| CX1g001503 | 1:24,378,033-24,378,776 | - | C1H1g21585 | C2H5g22988 | LOC_Os01g47780 | Os01g0668100 | - | Detail |
| CX1g000496 | 1:24,384,420-24,393,212 | + | C1H1g02552 | C2H1g26438 | LOC_Os01g47800 | Os01g0668300 | - | Detail |
| CX1g006814 | 1:24,456,736-24,463,451 | - | C1H1g22206 | C2H1g04896 | LOC_Os01g48060 | Os01g0670800 | OsARF2, OsETT2, ARF3a | Detail |
| CX1g002497 | 1:24,477,916-24,478,420 | + | - | - | - | Os11g0695975 | - | Detail |
| CX1g006501 | 1:24,486,571-24,486,720 | - | - | - | - | - | - | Detail |
| CX1g006626 | 1:24,490,196-24,494,470 | - | C1H1g00357 | C2H1g18055 | LOC_Os01g48130 | Os01g0672100 | - | Detail |
| CX1g000322 | 1:24,502,884-24,504,356 | - | C1H1g11272 | C2H1g22636 | LOC_Os01g48140 | Os01g0672166 | - | Detail |
| CX1g005190 | 1:24,512,874-24,528,645 | + | C1H1g22608 | C2H1g23590 | LOC_Os01g48170 | Os01g0672201 | - | Detail |
| CX1g001676 | 1:24,532,314-24,535,123 | + | C1H1g30509 | C2H1g10699 | LOC_Os01g48190 | Os01g0672400 | - | Detail |