| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g27162 | 9:19,021,887-19,023,725 | - | C1H9g18815 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C2H9g03456 | 9:19,024,895-19,026,937 | - | C1H9g04134 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C2H9g09986 | 9:19,040,180-19,040,616 | + | C1H9g07046 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C2H9g06709 | 9:19,042,621-19,048,413 | - | C1H9g06523 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C2H9g01538 | 9:19,051,561-19,057,154 | + | C1H9g19754 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C2H9g16021 | 9:19,057,688-19,061,764 | + | C1H9g21219 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| C2H9g21433 | 9:19,071,960-19,074,845 | + | C1H9g01697 | CX9g056918 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| C2H9g26806 | 9:19,076,762-19,086,439 | - | C1H9g21274 | CX9g057338 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| C2H9g27013 | 9:19,092,614-19,094,426 | - | C1H9g07375 | CX9g058103 | LOC_Os09g39060 | Os09g0564000 | - | Detail |
| C2H9g21279 | 9:19,098,085-19,100,923 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39070 | Os09g0564200 | - | Detail |
| C2H9g23865 | 9:19,108,617-19,110,153 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39090 | Os09g0564400 | - | Detail |
| C2H9g13270 | 9:19,121,816-19,124,616 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39110 | Os09g0564600 | - | Detail |
| C2H9g00317 | 9:19,126,925-19,128,682 | - | C1H9g27358 | CX9g058103 | LOC_Os09g39120 | Os09g0564700 | - | Detail |
| C2H9g01274 | 9:19,137,269-19,139,208 | - | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g29707 | 9:19,176,003-19,178,915 | + | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g17980 | 9:19,186,630-19,189,149 | - | C1H9g03665 | CX9g055784 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| C2H9g06735 | 9:19,189,868-19,191,873 | - | C1H9g23294 | CX9g055878 | LOC_Os09g39190 | Os09g0565300 | - | Detail |
| C2H9g05243 | 9:19,193,569-19,195,287 | - | C1H9g02800 | CX9g055878 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| C2H9g29461 | 9:19,195,507-19,199,219 | - | C1H9g15519 | CX9g056354 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| C2H9g27919 | 9:19,201,190-19,217,268 | + | C1H9g26476 | CX9g057714 | - | Os09g0565500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043727 | 6:3,746,373-3,747,812 | + | C1H6g28547 | C2H6g02365 | LOC_Os06g09240 | Os06g0192100 | OsLSC6 | Detail |
| CX6g045845 | 6:3,750,170-3,752,151 | - | C1H6g31613 | C2H6g19960 | LOC_Os06g09270 | Os06g0192400 | - | Detail |
| CX6g045203 | 6:3,756,593-3,763,610 | + | C1H6g27949 | C2H6g04525 | LOC_Os06g09280 | Os06g0192500 | - | Detail |
| CX6g042459 | 6:3,764,326-3,767,331 | + | C1H6g04586 | C2H6g12013 | LOC_Os06g09290 | Os06g0192600 | OsRpt1a | Detail |
| CX6g041198 | 6:3,776,331-3,777,299 | + | C1H6g09350 | C2H6g17649 | LOC_Os06g09310 | Os06g0192800 | OsATL69 | Detail |
| CX6g045517 | 6:3,784,934-3,787,243 | + | C1H6g30948 | C2H6g17864 | LOC_Os06g09320 | Os06g0192900 | - | Detail |
| CX6g043243 | 6:3,788,514-3,792,204 | - | C1H6g10031 | C2H6g04615 | LOC_Os06g09330 | Os06g0193000 | - | Detail |
| CX6g041391 | 6:3,795,450-3,795,608 | - | - | - | - | - | - | Detail |
| CX6g045049 | 6:3,795,842-3,798,213 | + | C1H6g30180 | C2H6g26815 | LOC_Os06g09340 | Os06g0193200 | - | Detail |
| CX6g043220 | 6:3,799,392-3,800,047 | - | C1H6g07725 | C2H6g30543 | LOC_Os06g09350 | Os06g0193300 | - | Detail |
| CX6g041840 | 6:3,806,410-3,815,798 | - | C1H6g11807 | C2H6g03934 | LOC_Os06g09370 | Os06g0193400 | - | Detail |
| CX6g041880 | 6:3,831,801-3,833,680 | + | C1H6g29803 | C2H6g08826 | LOC_Os06g09390 | Os06g0194000 | - | Detail |
| CX6g042151 | 6:3,854,011-3,855,521 | + | C1H6g31722 | C2H6g02269 | LOC_Os06g09420 | Os06g0194400 | - | Detail |
| CX6g044827 | 6:3,875,488-3,875,646 | + | - | - | - | - | - | Detail |
| CX6g042634 | 6:3,887,437-3,891,825 | - | C1H6g01501 | C2H6g27649 | LOC_Os06g09450 | Os06g0194900 | - | Detail |
| CX6g045871 | 6:3,903,106-3,912,483 | - | C1H6g27044 | C2H6g14723 | LOC_Os06g09540 | Os06g0195600 | - | Detail |
| CX6g045004 | 6:3,931,213-3,931,380 | - | - | - | - | - | - | Detail |
| CX6g042315 | 6:3,931,944-3,933,906 | + | C1H6g05206 | C2H6g17745 | LOC_Os06g09560 | Os06g0195800 | - | Detail |
| CX6g045819 | 6:3,936,224-3,938,254 | - | C1H6g25687 | C2H6g02523 | LOC_Os06g09570 | Os06g0195900 | - | Detail |
| CX6g041911 | 6:3,946,373-3,947,008 | - | - | C2H6g05188 | LOC_Os06g09600 | Os06g0196200 | - | Detail |