| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13421 | 2:30,379,410-30,380,372 | - | - | CX2g024909 | LOC_Os02g54450 | Os02g0785700 | - | Detail |
| C2H2g10345 | 2:30,381,783-30,382,312 | + | - | - | LOC_Os05g25680 | Os05g0321600 | - | Detail |
| C2H2g09400 | 2:30,384,038-30,384,562 | + | C1H2g22630 | CX2g022096 | LOC_Os02g54470 | Os02g0785800 | - | Detail |
| C2H2g24301 | 2:30,386,825-30,395,048 | + | C1H2g16607 | CX2g021693 | LOC_Os02g54490 | Os02g0785900 | - | Detail |
| C2H2g16599 | 2:30,396,428-30,404,789 | + | C1H2g04640 | CX2g024703 | LOC_Os02g54500 | Os02g0786000 | - | Detail |
| C2H2g21668 | 2:30,410,106-30,416,388 | + | C1H2g14270 | CX2g019009 | LOC_Os02g54510 | Os02g0786200 | - | Detail |
| C2H2g02803 | 2:30,424,686-30,428,199 | + | C1H2g29436 | CX2g024716 | LOC_Os02g54520 | Os02g0786400 | OsMYB36b | Detail |
| C2H2g17562 | 2:30,429,198-30,429,737 | + | C1H2g24406 | CX2g020901 | LOC_Os02g54530 | Os02g0786500 | - | Detail |
| C2H2g10089 | 2:30,433,843-30,434,364 | + | C1H2g01457 | CX2g020901 | LOC_Os02g54540 | Os02g0786500 | - | Detail |
| C2H2g17982 | 2:30,440,204-30,440,821 | + | C1H2g01457 | CX2g020771 | LOC_Os02g54560 | Os02g0786900 | - | Detail |
| C2H2g09660 | 2:30,441,711-30,442,247 | - | C1H2g13395 | CX2g023717 | LOC_Os02g54570 | Os02g0787000 | - | Detail |
| C2H2g14363 | 2:30,443,501-30,446,969 | + | C1H2g05721 | CX2g022090 | LOC_Os02g54580 | Os02g0787100 | - | Detail |
| C2H2g24176 | 2:30,447,856-30,448,053 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g27576 | 2:30,448,155-30,450,195 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g16691 | 2:30,450,311-30,451,725 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g16242 | 2:30,455,425-30,456,528 | - | C1H2g05581 | CX2g019876 | LOC_Os02g54600 | Os02g0787300 | SMG1, OsMKK4, MKK4, OsMKK4/SMG1 | Detail |
| C2H2g29050 | 2:30,480,799-30,485,502 | + | C1H2g05584 | CX2g023310 | LOC_Os02g54624 | Os02g0787500 | - | Detail |
| C2H2g29172 | 2:30,490,033-30,490,416 | + | C1H2g08821 | CX2g020275 | - | - | - | Detail |
| C2H2g09069 | 2:30,495,779-30,501,939 | + | C1H2g10849 | CX2g019134 | LOC_Os02g54640 | Os02g0787600 | - | Detail |
| C2H2g02130 | 2:30,503,464-30,510,511 | - | C1H2g10467 | CX2g020090 | LOC_Os02g54650 | Os02g0787800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042024 | 6:2,705,642-2,706,847 | - | C1H6g18212 | C2H6g17266 | LOC_Os06g07040 | Os06g0166500 | OsIAA20 | Detail |
| CX6g043721 | 6:2,713,033-2,715,696 | + | C1H6g06573 | C2H6g27641 | LOC_Os06g07070 | Os06g0166900 | LRRK1 | Detail |
| CX6g042858 | 6:2,716,741-2,726,381 | - | C1H6g00137 | C2H6g12104 | LOC_Os06g07080 | Os06g0167000 | - | Detail |
| CX6g041210 | 6:2,730,111-2,739,753 | + | C1H6g28166 | C2H6g09700 | LOC_Os06g07090 | Os06g0167100 | - | Detail |
| CX6g042095 | 6:2,743,325-2,744,431 | - | C1H6g09350 | C2H6g05608 | LOC_Os06g07100 | Os06g0167200 | - | Detail |
| CX6g045258 | 6:2,750,521-2,750,964 | - | - | - | - | - | - | Detail |
| CX6g041236 | 6:2,752,568-2,753,754 | + | C1H6g26206 | C2H6g27692 | LOC_Os06g07120 | Os06g0167400 | - | Detail |
| CX6g043487 | 6:2,755,028-2,762,723 | + | C1H6g16529 | C2H6g21083 | LOC_Os06g07130 | Os06g0167500 | - | Detail |
| CX6g045546 | 6:2,763,932-2,764,684 | + | C1H6g31129 | C2H6g24730 | LOC_Os06g07140 | Os06g0167600 | - | Detail |
| CX6g042737 | 6:2,768,228-2,768,506 | - | - | - | LOC_Os06g07150 | - | - | Detail |
| CX6g042965 | 6:2,770,350-2,773,702 | + | C1H6g16873 | C2H6g30342 | LOC_Os06g07160 | Os06g0168000 | - | Detail |
| CX6g045371 | 6:2,781,124-2,783,682 | + | C1H6g05276 | C2H6g27906 | LOC_Os06g07190 | Os06g0168400 | - | Detail |
| CX6g043526 | 6:2,786,564-2,788,778 | - | C1H6g23879 | C2H6g21990 | LOC_Os06g07200 | Os06g0168500 | OsSYP131b | Detail |
| CX6g044627 | 6:2,791,435-2,795,817 | - | C1H6g18550 | C2H6g24422 | LOC_Os06g07210 | Os06g0168600 | V3, v3, RNRL1, rnrl1 | Detail |
| CX6g043172 | 6:2,797,001-2,797,804 | - | - | C2H6g18274 | LOC_Os06g07220 | Os06g0168700 | - | Detail |
| CX6g043207 | 6:2,801,899-2,805,997 | - | C1H6g06629 | C2H6g21817 | LOC_Os06g07230 | Os06g0168800 | - | Detail |
| CX6g041839 | 6:2,809,183-2,809,978 | + | - | - | - | - | - | Detail |
| CX6g045290 | 6:2,812,796-2,813,846 | + | - | C2H6g07039 | - | - | - | Detail |
| CX6g041669 | 6:2,816,671-2,818,030 | + | C1H6g28668 | C2H6g24577 | LOC_Os06g07250 | Os06g0169001 | - | Detail |
| CX6g042301 | 6:2,819,408-2,822,915 | - | C1H6g21061 | C2H6g20577 | LOC_Os06g07260 | Os06g0170100 | - | Detail |