| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g16127 | 10:19,714,317-19,718,581 | + | - | - | - | - | - | Detail |
| C2H10g21795 | 10:19,723,016-19,723,748 | - | - | - | - | - | - | Detail |
| C2H10g03378 | 10:19,723,909-19,724,781 | - | - | CX10g009910 | LOC_Os10g40584 | Os10g0554001 | - | Detail |
| C2H10g02267 | 10:19,731,943-19,737,400 | + | C1H10g18964 | CX10g007550 | LOC_Os10g40590 | Os10g0554100 | - | Detail |
| C2H10g07153 | 10:19,738,712-19,744,037 | - | C1H10g16439 | CX10g009390 | LOC_Os10g40600 | Os10g0554200 | NRT1.1B, OsNRT1.1B, OsNPF6.5, NPF6.5 | Detail |
| C2H10g19889 | 10:19,757,452-19,759,520 | - | C1H10g00556 | CX10g008553 | LOC_Os10g40610 | Os10g0554300 | - | Detail |
| C2H10g18300 | 10:19,762,068-19,762,574 | + | C1H10g19113 | - | LOC_Os10g40614 | Os10g0552700 | - | Detail |
| C2H10g14918 | 10:19,763,633-19,766,081 | - | C1H10g29784 | CX10g010159 | LOC_Os10g40620 | Os10g0554900 | - | Detail |
| C2H10g03186 | 10:19,776,793-19,779,963 | + | C1H10g17774 | CX10g008244 | LOC_Os10g40640 | Os10g0555100 | OsGGT | Detail |
| C2H10g17492 | 10:19,780,579-19,782,118 | - | C1H10g15921 | CX10g007995 | LOC_Os10g40650 | Os10g0555200 | - | Detail |
| C2H10g25195 | 10:19,787,598-19,788,680 | - | - | CX10g008856 | LOC_Os10g40660 | Os10g0555300 | - | Detail |
| C2H10g04919 | 10:19,806,433-19,807,549 | - | C1H10g19120 | CX10g007989 | LOC_Os10g40700 | Os10g0555600 | - | Detail |
| C2H10g20347 | 10:19,812,275-19,813,512 | - | C1H10g16993 | CX10g007911 | LOC_Os10g40710 | Os10g0555700 | OsEXPB2 | Detail |
| C2H10g20545 | 10:19,825,862-19,827,776 | - | C1H10g15903 | CX10g010453 | LOC_Os10g40720 | Os10g0555900 | OsEXPB3 | Detail |
| C2H10g17527 | 10:19,839,684-19,842,118 | + | C1H10g31280 | CX10g008461 | LOC_Os10g40730 | Os10g0556100 | - | Detail |
| C2H10g17829 | 10:19,845,427-19,849,262 | - | C1H10g11805 | CX10g009492 | LOC_Os10g40740 | Os10g0556200 | - | Detail |
| C2H10g30183 | 10:19,857,549-19,858,001 | + | - | - | - | Os10g0556500 | - | Detail |
| C2H10g14014 | 10:19,860,719-19,879,904 | - | C1H10g29962 | CX10g008043 | LOC_Os10g40780 | Os10g0556700 | OsNOT1 | Detail |
| C2H10g09074 | 10:19,897,157-19,898,524 | + | C1H10g24304 | CX10g010658 | LOC_Os10g40810 | Os10g0557600 | OsGATA7 | Detail |
| C2H10g12261 | 10:19,905,567-19,906,652 | - | C1H10g12942 | CX10g010083 | LOC_Os10g40830 | Os10g0557900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042024 | 6:2,705,642-2,706,847 | - | C1H6g18212 | C2H6g17266 | LOC_Os06g07040 | Os06g0166500 | OsIAA20 | Detail |
| CX6g043721 | 6:2,713,033-2,715,696 | + | C1H6g06573 | C2H6g27641 | LOC_Os06g07070 | Os06g0166900 | LRRK1 | Detail |
| CX6g042858 | 6:2,716,741-2,726,381 | - | C1H6g00137 | C2H6g12104 | LOC_Os06g07080 | Os06g0167000 | - | Detail |
| CX6g041210 | 6:2,730,111-2,739,753 | + | C1H6g28166 | C2H6g09700 | LOC_Os06g07090 | Os06g0167100 | - | Detail |
| CX6g042095 | 6:2,743,325-2,744,431 | - | C1H6g09350 | C2H6g05608 | LOC_Os06g07100 | Os06g0167200 | - | Detail |
| CX6g045258 | 6:2,750,521-2,750,964 | - | - | - | - | - | - | Detail |
| CX6g041236 | 6:2,752,568-2,753,754 | + | C1H6g26206 | C2H6g27692 | LOC_Os06g07120 | Os06g0167400 | - | Detail |
| CX6g043487 | 6:2,755,028-2,762,723 | + | C1H6g16529 | C2H6g21083 | LOC_Os06g07130 | Os06g0167500 | - | Detail |
| CX6g045546 | 6:2,763,932-2,764,684 | + | C1H6g31129 | C2H6g24730 | LOC_Os06g07140 | Os06g0167600 | - | Detail |
| CX6g042737 | 6:2,768,228-2,768,506 | - | - | - | LOC_Os06g07150 | - | - | Detail |
| CX6g042965 | 6:2,770,350-2,773,702 | + | C1H6g16873 | C2H6g30342 | LOC_Os06g07160 | Os06g0168000 | - | Detail |
| CX6g045371 | 6:2,781,124-2,783,682 | + | C1H6g05276 | C2H6g27906 | LOC_Os06g07190 | Os06g0168400 | - | Detail |
| CX6g043526 | 6:2,786,564-2,788,778 | - | C1H6g23879 | C2H6g21990 | LOC_Os06g07200 | Os06g0168500 | OsSYP131b | Detail |
| CX6g044627 | 6:2,791,435-2,795,817 | - | C1H6g18550 | C2H6g24422 | LOC_Os06g07210 | Os06g0168600 | V3, v3, RNRL1, rnrl1 | Detail |
| CX6g043172 | 6:2,797,001-2,797,804 | - | - | C2H6g18274 | LOC_Os06g07220 | Os06g0168700 | - | Detail |
| CX6g043207 | 6:2,801,899-2,805,997 | - | C1H6g06629 | C2H6g21817 | LOC_Os06g07230 | Os06g0168800 | - | Detail |
| CX6g041839 | 6:2,809,183-2,809,978 | + | - | - | - | - | - | Detail |
| CX6g045290 | 6:2,812,796-2,813,846 | + | - | C2H6g07039 | - | - | - | Detail |
| CX6g041669 | 6:2,816,671-2,818,030 | + | C1H6g28668 | C2H6g24577 | LOC_Os06g07250 | Os06g0169001 | - | Detail |
| CX6g042301 | 6:2,819,408-2,822,915 | - | C1H6g21061 | C2H6g20577 | LOC_Os06g07260 | Os06g0170100 | - | Detail |