| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g11255 | 5:19,342,606-19,344,167 | + | C2H5g14285 | CX5g039945 | LOC_Os05g40240 | Os05g0480800 | - | Detail |
| C1H5g24027 | 5:19,351,518-19,354,476 | + | C2H5g11353 | CX5g037040 | LOC_Os05g40260 | Os05g0481000 | - | Detail |
| C1H5g02182 | 5:19,361,852-19,371,211 | + | C2H5g07339 | CX5g038324 | LOC_Os05g40270 | Os05g0481100 | - | Detail |
| C1H5g03756 | 5:19,371,583-19,375,540 | - | C2H5g09907 | CX5g039343 | LOC_Os05g40280 | Os05g0481400 | - | Detail |
| C1H5g03902 | 5:19,387,314-19,390,883 | - | C2H5g20428 | CX5g038848 | LOC_Os05g40290 | Os05g0481500 | - | Detail |
| C1H5g10469 | 5:19,397,817-19,398,361 | + | C2H5g27797 | CX5g036753 | LOC_Os05g40300 | Os05g0481600 | - | Detail |
| C1H5g24805 | 5:19,401,091-19,403,618 | - | C2H5g06900 | CX5g037459 | LOC_Os05g40310 | Os05g0481700 | - | Detail |
| C1H5g08499 | 5:19,405,903-19,407,457 | + | C2H5g25296 | CX5g038701 | LOC_Os05g40320 | Os05g0481800 | - | Detail |
| C1H5g14646 | 5:19,410,985-19,413,294 | - | C2H5g16978 | CX5g037406 | LOC_Os05g40330 | Os05g0481900 | - | Detail |
| C1H5g20454 | 5:19,416,011-19,416,892 | - | C2H5g15740 | CX5g040861 | LOC_Os05g40360 | - | - | Detail |
| C1H5g22811 | 5:19,418,853-19,425,042 | + | C2H2g01315 | CX5g037195 | LOC_Os03g61860 | - | - | Detail |
| C1H5g07154 | 5:19,455,504-19,455,984 | + | C2H5g03648 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C1H5g08150 | 5:19,461,940-19,464,121 | + | C2H5g22897 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C1H5g11883 | 5:19,465,057-19,465,692 | + | C2H5g02533 | CX5g038624 | LOC_Os05g40400 | Os05g0482501 | - | Detail |
| C1H5g19898 | 5:19,474,299-19,474,571 | - | - | - | - | Os01g0817900 | - | Detail |
| C1H5g01703 | 5:19,474,390-19,478,928 | + | C2H5g19376 | CX5g040561 | LOC_Os05g40410 | Os05g0482600 | - | Detail |
| C1H5g12944 | 5:19,479,056-19,483,746 | - | C2H5g12661 | CX5g037367 | LOC_Os05g40420 | Os05g0482700 | - | Detail |
| C1H5g09268 | 5:19,543,083-19,544,643 | - | C2H5g26553 | CX5g039268 | LOC_Os05g40590 | Os05g0539300 | - | Detail |
| C1H5g23451 | 5:19,545,742-19,547,608 | - | C2H5g23995 | CX5g039268 | LOC_Os05g40610 | Os05g0539300 | - | Detail |
| C1H5g31019 | 5:19,548,410-19,549,771 | + | C2H5g16811 | CX5g039268 | LOC_Os05g40620 | Os05g0539300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006198 | 1:24,123,063-24,127,725 | + | C1H1g04364 | C2H1g19924 | LOC_Os01g47460 | Os01g0664100 | OsCZMT1 | Detail |
| CX1g003179 | 1:24,129,446-24,131,671 | - | C1H1g29903 | C2H1g18806 | LOC_Os01g47470 | Os01g0664200 | - | Detail |
| CX1g000544 | 1:24,145,171-24,146,995 | + | C1H1g16252 | C2H1g30339 | LOC_Os01g47490 | Os01g0664500 | - | Detail |
| CX1g003222 | 1:24,165,777-24,171,388 | + | C1H1g00404 | C2H1g17352 | LOC_Os01g47530 | Os01g0665200 | OsWJUMK1 | Detail |
| CX1g007169 | 1:24,172,629-24,176,542 | - | C1H1g07482 | C2H1g18506 | LOC_Os01g47540 | Os01g0665300 | - | Detail |
| CX1g006729 | 1:24,178,958-24,179,383 | + | - | - | - | - | - | Detail |
| CX1g004981 | 1:24,183,108-24,187,901 | + | C1H1g04478 | C2H1g09086 | LOC_Os01g47550 | Os01g0665400 | - | Detail |
| CX1g003271 | 1:24,194,775-24,197,070 | - | C1H1g10117 | C2H1g23227 | LOC_Os01g47560 | Os01g0665500 | - | Detail |
| CX1g005881 | 1:24,230,657-24,232,528 | + | C1H5g16562 | C2H1g27651 | LOC_Os01g47570 | Os01g0665900 | - | Detail |
| CX1g002701 | 1:24,238,589-24,240,176 | - | C1H1g08061 | C2H1g09620 | LOC_Os01g47580 | Os01g0666000 | - | Detail |
| CX1g004856 | 1:24,243,465-24,246,531 | + | C1H1g22272 | C2H1g30465 | LOC_Os01g47600 | Os01g0666200 | - | Detail |
| CX1g005148 | 1:24,247,162-24,249,330 | - | C1H1g06997 | C2H1g20315 | LOC_Os01g47610 | Os01g0666400 | - | Detail |
| CX1g001286 | 1:24,250,493-24,252,792 | - | C1H1g13794 | C2H1g08177 | LOC_Os01g47620 | Os01g0666500 | - | Detail |
| CX1g005667 | 1:24,253,195-24,254,668 | + | C1H1g13937 | C2H1g01833 | LOC_Os01g47630 | Os01g0666600 | - | Detail |
| CX1g005314 | 1:24,255,401-24,256,519 | - | C1H1g31496 | C2H1g10090 | LOC_Os01g47635 | Os01g0895300 | - | Detail |
| CX1g003969 | 1:24,263,727-24,272,627 | + | C1H1g09475 | C2H1g17250 | LOC_Os01g47650 | Os01g0666800 | - | Detail |
| CX1g001568 | 1:24,273,210-24,273,668 | + | - | - | - | Os01g0666950 | - | Detail |
| CX1g006414 | 1:24,273,306-24,275,078 | - | C1H1g19365 | C2H1g08141 | LOC_Os01g47660 | Os01g0752300 | - | Detail |
| CX1g001813 | 1:24,275,918-24,277,147 | - | C1H1g20685 | C2H1g30375 | LOC_Os01g47670 | Os01g0667000 | - | Detail |
| CX1g007099 | 1:24,281,700-24,284,963 | - | C1H1g23877 | C2H1g14901 | LOC_Os01g47690 | Os01g0667200 | - | Detail |