| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08094 | 2:211,211-211,528 | + | C1H2g19728 | CX2g020829 | LOC_Os02g01355 | Os02g0104100 | - | Detail |
| C2H2g27871 | 2:215,546-219,540 | + | C1H2g28328 | CX2g018966 | LOC_Os02g01360 | Os02g0104200 | - | Detail |
| C2H2g24735 | 2:233,536-236,938 | - | C1H2g16519 | CX2g019468 | LOC_Os02g01380 | Os02g0104500 | - | Detail |
| C2H2g17888 | 2:258,982-263,199 | + | C1H2g14546 | CX2g023507 | LOC_Os02g01440 | Os02g0104700 | - | Detail |
| C2H2g21478 | 2:263,530-266,532 | + | C1H2g08400 | CX2g023194 | LOC_Os02g01450 | Os02g0104800 | - | Detail |
| C2H2g01204 | 2:267,329-269,627 | + | C1H2g29528 | CX2g018836 | LOC_Os02g01480 | Os02g0105000 | - | Detail |
| C2H2g05998 | 2:271,310-278,564 | + | C1H2g29383 | CX2g021940 | LOC_Os02g01490 | Os02g0105100 | - | Detail |
| C2H2g09640 | 2:280,377-286,877 | + | C1H2g28235 | CX2g023207 | LOC_Os02g01500 | Os02g0105200 | - | Detail |
| C2H2g21231 | 2:288,363-290,945 | + | C1H2g28206 | CX2g021696 | LOC_Os02g01510 | Os02g0105400 | - | Detail |
| C2H2g24250 | 2:291,419-291,893 | + | - | - | - | - | - | Detail |
| C2H2g29873 | 2:297,949-299,233 | - | C1H2g14256 | - | - | - | - | Detail |
| C2H2g25519 | 2:300,952-303,938 | + | C1H2g11350 | CX2g019294 | LOC_Os02g01520 | Os02g0105500 | - | Detail |
| C2H2g13554 | 2:306,100-307,564 | - | C1H2g25324 | CX2g023790 | LOC_Os02g01550 | Os02g0105800 | - | Detail |
| C2H2g03705 | 2:309,859-310,421 | - | C1H2g24054 | - | - | - | - | Detail |
| C2H2g04904 | 2:310,451-312,778 | - | C1H2g12279 | CX2g022675 | LOC_Os02g01560 | Os02g0105900 | - | Detail |
| C2H2g14375 | 2:323,479-327,376 | + | C1H2g27715 | CX2g024828 | LOC_Os02g01590 | Os02g0106100 | OsVIN2, SGS1 | Detail |
| C2H2g29220 | 2:344,477-348,837 | + | C1H2g12415 | CX2g021724 | LOC_Os02g01710 | Os02g0106700 | - | Detail |
| C2H2g28107 | 2:356,524-361,381 | + | C1H2g31700 | CX2g019834 | LOC_Os02g01720 | Os02g0106800 | - | Detail |
| C2H2g03800 | 2:362,178-364,337 | - | C1H2g27373 | CX2g019638 | LOC_Os02g01730 | Os02g0106900 | - | Detail |
| C2H2g07259 | 2:369,161-377,240 | + | C1H2g28224 | CX2g024029 | LOC_Os02g01740 | Os02g0107000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041328 | 6:2,381,793-2,381,945 | + | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX6g042432 | 6:2,413,657-2,415,314 | - | C1H6g10484 | C2H6g17841 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| CX6g044314 | 6:2,417,901-2,421,288 | - | C1H6g16222 | C2H6g20170 | LOC_Os06g06530 | Os06g0160400 | HGW | Detail |
| CX6g043478 | 6:2,425,527-2,426,552 | + | C1H6g05796 | C2H6g04144 | LOC_Os06g06540 | Os06g0181700 | OsERF2 | Detail |
| CX6g045401 | 6:2,428,296-2,430,434 | - | C1H6g16022 | C2H6g19792 | LOC_Os06g06550 | Os06g0160600 | - | Detail |
| CX6g043739 | 6:2,432,465-2,439,265 | - | C1H6g13902 | C2H6g23161 | LOC_Os06g06560 | Os06g0160700 | SSI, OsSSI, SSS 1, SSS1, SS1 | Detail |
| CX6g042247 | 6:2,442,970-2,443,371 | - | - | C2H6g04920 | LOC_Os06g06570 | Os06g0160800 | - | Detail |
| CX6g042842 | 6:2,445,931-2,446,383 | - | - | - | - | - | - | Detail |
| CX6g043772 | 6:2,450,000-2,450,548 | + | C1H6g16824 | C2H6g21185 | - | - | - | Detail |
| CX6g043909 | 6:2,489,229-2,489,749 | - | C1H6g17960 | C2H6g27506 | - | - | - | Detail |
| CX6g045922 | 6:2,493,753-2,495,672 | + | C1H6g05484 | C2H6g23738 | LOC_Os06g06720 | Os06g0162500 | - | Detail |
| CX6g045009 | 6:2,496,033-2,501,284 | - | C1H6g16792 | C2H6g27712 | - | Os06g0162550 | OsZAS2 | Detail |
| CX6g044324 | 6:2,503,262-2,507,256 | - | C1H6g15993 | C2H6g27712 | LOC_Os06g06730 | Os06g0162600 | - | Detail |
| CX6g044673 | 6:2,508,448-2,510,749 | + | C1H6g20899 | C2H6g18003 | LOC_Os06g06740 | Os06g0162700 | - | Detail |
| CX6g042913 | 6:2,511,416-2,517,561 | - | C1H6g08500 | C2H6g28937 | LOC_Os06g06750 | Os06g0162800 | OsMADS5 | Detail |
| CX6g045187 | 6:2,519,877-2,520,080 | + | - | - | - | - | - | Detail |
| CX6g042202 | 6:2,523,186-2,523,401 | - | - | C2H6g12221 | - | - | - | Detail |
| CX6g044205 | 6:2,524,335-2,528,705 | - | C1H6g00041 | C2H6g12042 | LOC_Os06g06760 | Os06g0163000 | - | Detail |
| CX6g041513 | 6:2,531,699-2,536,567 | + | C1H6g04308 | C2H6g02736 | LOC_Os06g06770 | Os06g0163200 | - | Detail |
| CX6g045832 | 6:2,540,999-2,543,981 | + | C1H6g18381 | C2H6g03282 | LOC_Os06g06780 | Os06g0163300 | - | Detail |