| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g26989 | 9:10,267,142-10,269,185 | - | C2H9g28312 | CX9g056709 | LOC_Os09g20284 | Os09g0368200 | - | Detail |
| C1H9g04832 | 9:10,272,002-10,275,246 | - | C2H9g01360 | CX9g056709 | LOC_Os09g20284 | Os09g0368500 | PAO7, OsPAO7, OsPAO3 | Detail |
| C1H9g21942 | 9:10,279,024-10,279,239 | - | C2H9g13990 | - | - | - | - | Detail |
| C1H9g10485 | 9:10,279,315-10,280,312 | - | - | - | - | - | - | Detail |
| C1H9g07275 | 9:10,298,257-10,304,189 | + | C2H9g11239 | CX9g057276 | LOC_Os09g20340 | Os09g0368900 | - | Detail |
| C1H9g13671 | 9:10,314,316-10,315,735 | + | C2H9g15745 | CX9g057652 | LOC_Os09g20350 | Os09g0369000 | OsDREB6 | Detail |
| C1H9g26600 | 9:10,341,548-10,343,880 | + | C2H9g22049 | CX9g055870 | LOC_Os09g20390 | Os09g0369400 | OsTPP7 | Detail |
| C1H9g20254 | 9:10,353,292-10,355,065 | - | C2H9g18178 | CX9g058083 | LOC_Os09g20400 | Os09g0369500 | - | Detail |
| C1H9g05408 | 9:10,374,537-10,380,851 | - | C2H9g15437 | CX9g057823 | LOC_Os09g20430 | Os09g0370200 | - | Detail |
| C1H9g09768 | 9:10,413,922-10,417,244 | + | C2H9g06892 | - | LOC_Os09g20480 | Os09g0371000 | - | Detail |
| C1H9g29795 | 9:10,420,183-10,420,524 | + | C2H9g09333 | - | LOC_Os09g20490 | Os09g0371100 | - | Detail |
| C1H9g15773 | 9:10,421,746-10,423,310 | + | C2H9g23354 | - | LOC_Os09g20490 | Os09g0371100 | - | Detail |
| C1H9g10150 | 9:10,424,789-10,427,954 | + | C2H9g23354 | - | LOC_Os09g20500 | Os09g0371200 | - | Detail |
| C1H9g30442 | 9:10,434,460-10,436,781 | + | C2H9g03171 | - | LOC_Os09g20510 | Os09g0371100 | - | Detail |
| C1H9g14290 | 9:10,442,094-10,443,664 | + | C2H9g13661 | - | LOC_Os09g20520 | Os09g0371200 | - | Detail |
| C1H9g13255 | 9:10,452,109-10,458,316 | + | C2H9g29737 | CX9g056822 | LOC_Os09g20550 | Os09g0371700 | - | Detail |
| C1H9g24353 | 9:10,459,637-10,462,814 | + | C2H9g20914 | CX9g058116 | LOC_Os09g20560 | Os09g0371800 | - | Detail |
| C1H9g20102 | 9:10,485,231-10,489,390 | + | C2H9g18955 | CX9g056699 | LOC_Os09g20590 | Os09g0372400 | - | Detail |
| C1H9g04374 | 9:10,490,836-10,492,006 | + | C2H9g18955 | CX9g056699 | LOC_Os09g20590 | Os09g0372400 | - | Detail |
| C1H9g21178 | 9:10,502,244-10,504,235 | + | C2H9g10145 | CX9g056705 | LOC_Os09g20630 | Os09g0372700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041328 | 6:2,381,793-2,381,945 | + | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX6g042432 | 6:2,413,657-2,415,314 | - | C1H6g10484 | C2H6g17841 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| CX6g044314 | 6:2,417,901-2,421,288 | - | C1H6g16222 | C2H6g20170 | LOC_Os06g06530 | Os06g0160400 | HGW | Detail |
| CX6g043478 | 6:2,425,527-2,426,552 | + | C1H6g05796 | C2H6g04144 | LOC_Os06g06540 | Os06g0181700 | OsERF2 | Detail |
| CX6g045401 | 6:2,428,296-2,430,434 | - | C1H6g16022 | C2H6g19792 | LOC_Os06g06550 | Os06g0160600 | - | Detail |
| CX6g043739 | 6:2,432,465-2,439,265 | - | C1H6g13902 | C2H6g23161 | LOC_Os06g06560 | Os06g0160700 | SSI, OsSSI, SSS 1, SSS1, SS1 | Detail |
| CX6g042247 | 6:2,442,970-2,443,371 | - | - | C2H6g04920 | LOC_Os06g06570 | Os06g0160800 | - | Detail |
| CX6g042842 | 6:2,445,931-2,446,383 | - | - | - | - | - | - | Detail |
| CX6g043772 | 6:2,450,000-2,450,548 | + | C1H6g16824 | C2H6g21185 | - | - | - | Detail |
| CX6g043909 | 6:2,489,229-2,489,749 | - | C1H6g17960 | C2H6g27506 | - | - | - | Detail |
| CX6g045922 | 6:2,493,753-2,495,672 | + | C1H6g05484 | C2H6g23738 | LOC_Os06g06720 | Os06g0162500 | - | Detail |
| CX6g045009 | 6:2,496,033-2,501,284 | - | C1H6g16792 | C2H6g27712 | - | Os06g0162550 | OsZAS2 | Detail |
| CX6g044324 | 6:2,503,262-2,507,256 | - | C1H6g15993 | C2H6g27712 | LOC_Os06g06730 | Os06g0162600 | - | Detail |
| CX6g044673 | 6:2,508,448-2,510,749 | + | C1H6g20899 | C2H6g18003 | LOC_Os06g06740 | Os06g0162700 | - | Detail |
| CX6g042913 | 6:2,511,416-2,517,561 | - | C1H6g08500 | C2H6g28937 | LOC_Os06g06750 | Os06g0162800 | OsMADS5 | Detail |
| CX6g045187 | 6:2,519,877-2,520,080 | + | - | - | - | - | - | Detail |
| CX6g042202 | 6:2,523,186-2,523,401 | - | - | C2H6g12221 | - | - | - | Detail |
| CX6g044205 | 6:2,524,335-2,528,705 | - | C1H6g00041 | C2H6g12042 | LOC_Os06g06760 | Os06g0163000 | - | Detail |
| CX6g041513 | 6:2,531,699-2,536,567 | + | C1H6g04308 | C2H6g02736 | LOC_Os06g06770 | Os06g0163200 | - | Detail |
| CX6g045832 | 6:2,540,999-2,543,981 | + | C1H6g18381 | C2H6g03282 | LOC_Os06g06780 | Os06g0163300 | - | Detail |