| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19964 | 4:16,380,636-16,382,143 | + | C1H4g06922 | CX4g033567 | LOC_Os04g32320 | - | - | Detail |
| C2H4g18193 | 4:16,382,283-16,383,247 | + | C1H4g06922 | CX4g034392 | LOC_Os04g32320 | Os04g0394100 | - | Detail |
| C2H4g16524 | 4:16,384,767-16,389,103 | + | C1H4g17845 | CX4g035538 | LOC_Os04g32330 | Os04g0394200 | - | Detail |
| C2H4g25961 | 4:16,389,633-16,397,330 | - | C1H4g05869 | CX4g034536 | LOC_Os04g32340 | Os04g0394300 | - | Detail |
| C2H4g27874 | 4:16,401,522-16,407,381 | - | C1H4g02701 | CX4g036042 | LOC_Os04g32350 | Os04g0394500 | DGS1, RPC4 | Detail |
| C2H4g13468 | 4:16,417,595-16,424,549 | + | C1H4g04290 | CX4g032930 | LOC_Os04g32370 | Os04g0394700 | - | Detail |
| C2H4g07831 | 4:16,440,382-16,444,853 | - | C1H4g22256 | CX4g033841 | LOC_Os04g32460 | Os04g0395600 | - | Detail |
| C2H4g01216 | 4:16,464,280-16,464,816 | - | C1H4g21629 | CX4g036177 | LOC_Os04g32470 | Os04g0395700 | - | Detail |
| C2H4g05465 | 4:16,475,450-16,479,216 | + | C1H4g00131 | CX4g033931 | LOC_Os04g32480 | Os04g0395800 | - | Detail |
| C2H4g15362 | 4:16,481,596-16,487,126 | - | C1H4g20584 | CX4g035337 | LOC_Os04g32490 | Os04g0395900 | - | Detail |
| C2H4g27206 | 4:16,549,896-16,561,697 | + | C1H4g10776 | CX4g031625 | LOC_Os04g32510 | Os04g0396500 | LAX2 | Detail |
| C2H4g12362 | 4:16,598,626-16,602,409 | + | C1H4g30291 | CX4g032605 | LOC_Os04g32540 | Os04g0396800 | - | Detail |
| C2H4g11756 | 4:16,608,414-16,609,643 | + | C1H4g11763 | CX4g036117 | LOC_Os04g32550 | Os04g0397000 | - | Detail |
| C2H4g07574 | 4:16,610,422-16,616,979 | - | C1H4g04793 | CX4g034837 | LOC_Os04g32560 | Os04g0397100 | - | Detail |
| C2H4g00787 | 4:16,620,097-16,622,038 | + | C1H4g23944 | CX4g031977 | LOC_Os04g32580 | Os04g0397400 | - | Detail |
| C2H4g00959 | 4:16,622,697-16,625,333 | - | C1H4g13851 | CX4g033053 | LOC_Os04g32590 | Os04g0397500 | - | Detail |
| C2H4g13266 | 4:16,634,069-16,634,282 | + | C1H4g24982 | - | LOC_Os04g32600 | Os04g0397700 | - | Detail |
| C2H4g24848 | 4:16,634,291-16,636,040 | + | C1H4g24982 | - | LOC_Os04g32600 | Os04g0397700 | - | Detail |
| C2H4g18306 | 4:16,650,397-16,653,619 | + | C1H4g01528 | CX4g032640 | LOC_Os04g32620 | Os04g0398000 | - | Detail |
| C2H4g26614 | 4:16,672,397-16,677,612 | + | C1H4g13821 | CX4g036075 | LOC_Os04g32650 | Os04g0398300 | OsGlyRS1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041300 | 6:2,231,383-2,232,522 | - | C1H6g21303 | C2H6g30528 | LOC_Os06g06230 | Os06g0156400 | - | Detail |
| CX6g043272 | 6:2,238,448-2,238,609 | + | - | - | - | - | - | Detail |
| CX6g042021 | 6:2,241,576-2,243,336 | + | C1H6g10913 | C2H6g24163 | LOC_Os06g06250 | Os06g0156600 | OsGELP77 | Detail |
| CX6g043371 | 6:2,244,987-2,246,279 | + | C1H6g27119 | C2H6g05189 | LOC_Os06g06260 | Os06g0156700 | OsGLIP2 | Detail |
| CX6g041349 | 6:2,248,951-2,249,571 | + | C1H6g30049 | C2H6g07966 | - | Os06g0247800 | - | Detail |
| CX6g041514 | 6:2,250,141-2,254,963 | + | C1H6g10702 | C2H6g22760 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| CX6g041481 | 6:2,256,388-2,258,838 | - | C1H6g08331 | C2H6g18770 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| CX6g042252 | 6:2,275,082-2,276,404 | + | C1H6g29479 | C2H6g09001 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| CX6g045894 | 6:2,285,787-2,287,932 | + | C1H6g06407 | C2H6g23992 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| CX6g041455 | 6:2,298,064-2,298,429 | + | C1H6g29691 | C2H6g09872 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| CX6g043465 | 6:2,300,620-2,301,100 | + | C1H6g13605 | C2H6g19375 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| CX6g041165 | 6:2,302,652-2,310,361 | + | C1H6g01052 | C2H6g03223 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| CX6g041162 | 6:2,312,464-2,315,764 | + | C1H6g08202 | C2H6g20805 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| CX6g044558 | 6:2,318,504-2,324,599 | + | C1H6g28677 | C2H6g18246 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| CX6g044801 | 6:2,325,680-2,329,502 | - | C1H6g07185 | C2H6g22243 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| CX6g043926 | 6:2,332,720-2,333,148 | + | - | - | LOC_Os06g08700 | - | - | Detail |
| CX6g045279 | 6:2,333,467-2,337,321 | - | C1H6g00361 | C2H6g03461 | LOC_Os06g06390 | Os06g0158400 | - | Detail |
| CX6g045460 | 6:2,345,579-2,348,148 | - | C1H6g29953 | C2H6g18686 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| CX6g044562 | 6:2,351,694-2,352,623 | + | - | C2H6g00327 | LOC_Os06g06430 | Os06g0158800 | - | Detail |
| CX6g041204 | 6:2,353,882-2,361,660 | - | C1H6g02873 | C2H6g14590 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |