| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g18553 | 3:23,007,832-23,010,545 | + | C1H3g23863 | CX3g025383 | LOC_Os03g44300 | Os03g0645100 | - | Detail |
| C2H3g29997 | 3:23,010,960-23,016,176 | - | C1H3g29402 | CX3g028384 | LOC_Os03g44310 | Os03g0645200 | - | Detail |
| C2H3g05207 | 3:23,058,639-23,064,268 | - | - | - | - | - | - | Detail |
| C2H3g11048 | 3:23,115,210-23,119,455 | + | C1H3g02767 | CX3g027204 | LOC_Os03g44420 | Os03g0646100 | - | Detail |
| C2H3g26038 | 3:23,120,545-23,121,900 | - | C1H3g18608 | CX3g026220 | LOC_Os03g44430 | Os03g0646200 | - | Detail |
| C2H3g09160 | 3:23,122,399-23,125,766 | + | C1H3g15306 | CX3g030130 | LOC_Os03g44440 | Os03g0646300 | OsCNGC4 | Detail |
| C2H3g09347 | 3:23,128,849-23,129,634 | - | C1H3g01932 | CX3g029288 | LOC_Os03g44450 | Os03g0646400 | - | Detail |
| C2H3g17378 | 3:23,133,955-23,142,457 | + | C1H3g04677 | CX3g025480 | LOC_Os03g44484 | Os03g0646800 | - | Detail |
| C2H3g09600 | 3:23,142,817-23,151,758 | - | C1H3g15319 | CX3g030610 | LOC_Os03g44500 | Os03g0646900 | OsPPKL1, GL3.1 | Detail |
| C2H3g20933 | 3:23,168,070-23,171,467 | - | C1H3g31672 | CX3g028021 | LOC_Os03g44530 | Os03g0647500 | - | Detail |
| C2H3g08581 | 3:23,174,388-23,179,714 | - | C1H3g00783 | CX3g025465 | LOC_Os03g44540 | Os03g0647600 | OsNF-YA3, HAP2H | Detail |
| C2H3g28034 | 3:23,195,482-23,199,190 | - | C1H3g28506 | CX3g026616 | LOC_Os03g44560 | Os03g0647800 | - | Detail |
| C2H3g20748 | 3:23,213,648-23,220,005 | - | C1H3g04139 | CX3g026899 | LOC_Os03g44610 | Os03g0648300 | - | Detail |
| C2H3g20479 | 3:23,224,903-23,228,653 | + | C1H3g01950 | CX3g030255 | LOC_Os03g44620 | Os03g0648400 | - | Detail |
| C2H3g07590 | 3:23,228,841-23,229,386 | - | C1H3g13484 | CX3g030166 | LOC_Os03g44630 | Os03g0648500 | - | Detail |
| C2H3g10057 | 3:23,238,085-23,239,086 | - | C1H3g13830 | CX3g029294 | LOC_Os03g44650 | Os03g0648800 | - | Detail |
| C2H3g02590 | 3:23,241,528-23,245,187 | + | C1H3g12327 | CX3g030053 | LOC_Os03g44660 | Os03g0648900 | - | Detail |
| C2H3g08448 | 3:23,246,672-23,250,208 | - | C1H3g07360 | CX3g030188 | LOC_Os03g44670 | Os03g0649000 | - | Detail |
| C2H3g18182 | 3:23,271,386-23,272,083 | + | C1H3g11970 | CX3g028790 | - | - | - | Detail |
| C2H3g11794 | 3:23,297,378-23,307,223 | + | C1H3g00053 | CX3g029987 | LOC_Os03g44710 | Os03g0650000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041300 | 6:2,231,383-2,232,522 | - | C1H6g21303 | C2H6g30528 | LOC_Os06g06230 | Os06g0156400 | - | Detail |
| CX6g043272 | 6:2,238,448-2,238,609 | + | - | - | - | - | - | Detail |
| CX6g042021 | 6:2,241,576-2,243,336 | + | C1H6g10913 | C2H6g24163 | LOC_Os06g06250 | Os06g0156600 | OsGELP77 | Detail |
| CX6g043371 | 6:2,244,987-2,246,279 | + | C1H6g27119 | C2H6g05189 | LOC_Os06g06260 | Os06g0156700 | OsGLIP2 | Detail |
| CX6g041349 | 6:2,248,951-2,249,571 | + | C1H6g30049 | C2H6g07966 | - | Os06g0247800 | - | Detail |
| CX6g041514 | 6:2,250,141-2,254,963 | + | C1H6g10702 | C2H6g22760 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| CX6g041481 | 6:2,256,388-2,258,838 | - | C1H6g08331 | C2H6g18770 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| CX6g042252 | 6:2,275,082-2,276,404 | + | C1H6g29479 | C2H6g09001 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| CX6g045894 | 6:2,285,787-2,287,932 | + | C1H6g06407 | C2H6g23992 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| CX6g041455 | 6:2,298,064-2,298,429 | + | C1H6g29691 | C2H6g09872 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| CX6g043465 | 6:2,300,620-2,301,100 | + | C1H6g13605 | C2H6g19375 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| CX6g041165 | 6:2,302,652-2,310,361 | + | C1H6g01052 | C2H6g03223 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| CX6g041162 | 6:2,312,464-2,315,764 | + | C1H6g08202 | C2H6g20805 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| CX6g044558 | 6:2,318,504-2,324,599 | + | C1H6g28677 | C2H6g18246 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| CX6g044801 | 6:2,325,680-2,329,502 | - | C1H6g07185 | C2H6g22243 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| CX6g043926 | 6:2,332,720-2,333,148 | + | - | - | LOC_Os06g08700 | - | - | Detail |
| CX6g045279 | 6:2,333,467-2,337,321 | - | C1H6g00361 | C2H6g03461 | LOC_Os06g06390 | Os06g0158400 | - | Detail |
| CX6g045460 | 6:2,345,579-2,348,148 | - | C1H6g29953 | C2H6g18686 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| CX6g044562 | 6:2,351,694-2,352,623 | + | - | C2H6g00327 | LOC_Os06g06430 | Os06g0158800 | - | Detail |
| CX6g041204 | 6:2,353,882-2,361,660 | - | C1H6g02873 | C2H6g14590 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |