| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g04834 | 3:19,023,544-19,035,588 | - | C1H3g31240 | CX3g028524 | LOC_Os03g37270 | Os03g0569900 | - | Detail |
| C2H3g07443 | 3:19,040,751-19,045,537 | - | C1H3g30706 | CX3g031074 | LOC_Os03g37290 | Os03g0570100 | - | Detail |
| C2H3g06300 | 3:19,054,771-19,060,119 | - | C1H3g18124 | CX3g029054 | LOC_Os03g37320 | Os03g0570200 | - | Detail |
| C2H3g03314 | 3:19,126,506-19,131,597 | - | C1H3g17549 | CX3g025116 | LOC_Os03g37411 | Os03g0570800 | - | Detail |
| C2H3g02646 | 3:19,151,101-19,161,292 | - | C1H3g27432 | CX3g029952 | LOC_Os03g37470 | Os03g0571700 | - | Detail |
| C2H3g25696 | 3:19,165,102-19,166,952 | - | - | CX1g003432 | - | - | - | Detail |
| C2H3g08828 | 3:19,188,588-19,195,196 | - | C1H3g08970 | CX3g030772 | LOC_Os03g37490 | Os03g0571900 | PEZ1 | Detail |
| C2H3g29483 | 3:19,196,521-19,197,005 | - | C1H3g05664 | CX3g028394 | - | - | - | Detail |
| C2H3g08636 | 3:19,226,195-19,229,269 | + | C1H3g17823 | - | LOC_Os03g37060 | - | - | Detail |
| C2H3g22194 | 3:19,244,584-19,246,211 | - | C1H3g04391 | CX3g029443 | LOC_Os03g37570 | Os03g0572250 | - | Detail |
| C2H3g06732 | 3:19,247,195-19,249,428 | - | C1H3g31167 | CX3g029172 | LOC_Os03g37580 | Os03g0572300 | - | Detail |
| C2H3g26206 | 3:19,263,500-19,270,752 | - | C1H3g08142 | CX3g027413 | LOC_Os03g37640 | Os03g0572900 | - | Detail |
| C2H3g29849 | 3:19,270,508-19,278,349 | + | - | CX3g028989 | - | - | - | Detail |
| C2H3g15030 | 3:19,278,660-19,284,533 | - | C1H3g26338 | CX3g025229 | LOC_Os03g37920 | Os03g0164400 | - | Detail |
| C2H3g09050 | 3:19,321,807-19,326,813 | - | C1H3g26725 | CX3g027370 | LOC_Os03g37720 | Os03g0573500 | - | Detail |
| C2H3g15322 | 3:19,373,704-19,375,021 | - | C1H5g00153 | CX3g028459 | - | - | - | Detail |
| C2H3g00015 | 3:19,380,984-19,387,931 | - | C1H3g02923 | CX3g027506 | LOC_Os03g37830 | Os03g0574900 | - | Detail |
| C2H3g16573 | 3:19,412,974-19,417,607 | - | C1H3g18240 | CX3g028769 | LOC_Os03g37840 | Os03g0575200 | OsHAK16 | Detail |
| C2H3g27235 | 3:19,468,189-19,472,420 | - | C1H3g26043 | CX3g030121 | LOC_Os03g37930 | Os03g0576200 | OsHAK21 | Detail |
| C2H3g10576 | 3:19,484,275-19,486,264 | + | C1H3g08766 | CX3g030987 | LOC_Os03g37950 | Os03g0576400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041300 | 6:2,231,383-2,232,522 | - | C1H6g21303 | C2H6g30528 | LOC_Os06g06230 | Os06g0156400 | - | Detail |
| CX6g043272 | 6:2,238,448-2,238,609 | + | - | - | - | - | - | Detail |
| CX6g042021 | 6:2,241,576-2,243,336 | + | C1H6g10913 | C2H6g24163 | LOC_Os06g06250 | Os06g0156600 | OsGELP77 | Detail |
| CX6g043371 | 6:2,244,987-2,246,279 | + | C1H6g27119 | C2H6g05189 | LOC_Os06g06260 | Os06g0156700 | OsGLIP2 | Detail |
| CX6g041349 | 6:2,248,951-2,249,571 | + | C1H6g30049 | C2H6g07966 | - | Os06g0247800 | - | Detail |
| CX6g041514 | 6:2,250,141-2,254,963 | + | C1H6g10702 | C2H6g22760 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| CX6g041481 | 6:2,256,388-2,258,838 | - | C1H6g08331 | C2H6g18770 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| CX6g042252 | 6:2,275,082-2,276,404 | + | C1H6g29479 | C2H6g09001 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| CX6g045894 | 6:2,285,787-2,287,932 | + | C1H6g06407 | C2H6g23992 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| CX6g041455 | 6:2,298,064-2,298,429 | + | C1H6g29691 | C2H6g09872 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| CX6g043465 | 6:2,300,620-2,301,100 | + | C1H6g13605 | C2H6g19375 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| CX6g041165 | 6:2,302,652-2,310,361 | + | C1H6g01052 | C2H6g03223 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| CX6g041162 | 6:2,312,464-2,315,764 | + | C1H6g08202 | C2H6g20805 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| CX6g044558 | 6:2,318,504-2,324,599 | + | C1H6g28677 | C2H6g18246 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| CX6g044801 | 6:2,325,680-2,329,502 | - | C1H6g07185 | C2H6g22243 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| CX6g043926 | 6:2,332,720-2,333,148 | + | - | - | LOC_Os06g08700 | - | - | Detail |
| CX6g045279 | 6:2,333,467-2,337,321 | - | C1H6g00361 | C2H6g03461 | LOC_Os06g06390 | Os06g0158400 | - | Detail |
| CX6g045460 | 6:2,345,579-2,348,148 | - | C1H6g29953 | C2H6g18686 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| CX6g044562 | 6:2,351,694-2,352,623 | + | - | C2H6g00327 | LOC_Os06g06430 | Os06g0158800 | - | Detail |
| CX6g041204 | 6:2,353,882-2,361,660 | - | C1H6g02873 | C2H6g14590 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |