| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g08564 | 12:13,455,023-13,455,244 | - | - | - | - | - | - | Detail |
| C1H12g04888 | 12:13,492,676-13,502,859 | - | C2H12g01296 | CX12g016408 | LOC_Os12g26290 | Os12g0448900 | PIOX, RalphaO | Detail |
| C1H12g07862 | 12:13,586,408-13,587,597 | + | C2H12g01913 | CX12g016148 | LOC_Os12g26380 | Os12g0449650 | OsDIR55 | Detail |
| C1H12g13980 | 12:13,617,118-13,620,334 | + | C2H12g29657 | CX12g018387 | - | Os12g0567500 | - | Detail |
| C1H12g05511 | 12:13,639,552-13,640,587 | + | C2H12g29900 | CX12g016140 | - | Os12g0130600 | - | Detail |
| C1H12g04802 | 12:13,706,534-13,707,943 | - | C2H12g29931 | CX12g015662 | LOC_Os12g26470 | Os12g0450300 | - | Detail |
| C1H12g25647 | 12:13,712,018-13,713,292 | + | C2H12g27386 | CX12g017055 | - | - | - | Detail |
| C1H12g26164 | 12:13,723,929-13,725,588 | - | C2H10g11385 | CX10g010715 | - | - | - | Detail |
| C1H12g28415 | 12:13,725,754-13,725,972 | - | - | - | - | - | - | Detail |
| C1H12g05560 | 12:13,736,338-13,736,985 | - | C2H12g28828 | CX12g018036 | LOC_Os12g26510 | Os12g0451300 | - | Detail |
| C1H12g24395 | 12:13,800,388-13,801,275 | + | - | - | - | - | - | Detail |
| C1H12g22387 | 12:13,970,521-13,971,981 | + | C2H12g01698 | CX12g018218 | LOC_Os12g26880 | Os12g0454600 | - | Detail |
| C1H12g10028 | 12:13,979,547-13,984,128 | - | C2H12g26277 | CX12g016039 | - | - | - | Detail |
| C1H12g28368 | 12:14,031,771-14,032,397 | + | - | - | LOC_Os12g26960 | Os12g0455000 | - | Detail |
| C1H12g16677 | 12:14,081,132-14,083,655 | - | - | CX12g017142 | LOC_Os12g27050 | Os12g0456000 | - | Detail |
| C1H12g23121 | 12:14,083,728-14,087,078 | + | C2H12g20253 | CX12g017975 | LOC_Os12g27060 | Os12g0456100 | - | Detail |
| C1H12g22119 | 12:14,093,466-14,095,882 | - | C2H12g20046 | CX12g016746 | LOC_Os12g27070 | Os12g0456200 | - | Detail |
| C1H12g04965 | 12:14,101,977-14,103,274 | + | C2H12g00613 | CX12g016453 | LOC_Os12g27090 | - | - | Detail |
| C1H12g13521 | 12:14,105,629-14,110,463 | + | C2H12g27509 | CX12g016453 | LOC_Os12g27090 | Os12g0456400 | - | Detail |
| C1H12g25831 | 12:14,128,772-14,128,966 | + | C2H12g10115 | CX12g016959 | LOC_Os12g27190 | Os12g0457200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041300 | 6:2,231,383-2,232,522 | - | C1H6g21303 | C2H6g30528 | LOC_Os06g06230 | Os06g0156400 | - | Detail |
| CX6g043272 | 6:2,238,448-2,238,609 | + | - | - | - | - | - | Detail |
| CX6g042021 | 6:2,241,576-2,243,336 | + | C1H6g10913 | C2H6g24163 | LOC_Os06g06250 | Os06g0156600 | OsGELP77 | Detail |
| CX6g043371 | 6:2,244,987-2,246,279 | + | C1H6g27119 | C2H6g05189 | LOC_Os06g06260 | Os06g0156700 | OsGLIP2 | Detail |
| CX6g041349 | 6:2,248,951-2,249,571 | + | C1H6g30049 | C2H6g07966 | - | Os06g0247800 | - | Detail |
| CX6g041514 | 6:2,250,141-2,254,963 | + | C1H6g10702 | C2H6g22760 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| CX6g041481 | 6:2,256,388-2,258,838 | - | C1H6g08331 | C2H6g18770 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| CX6g042252 | 6:2,275,082-2,276,404 | + | C1H6g29479 | C2H6g09001 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| CX6g045894 | 6:2,285,787-2,287,932 | + | C1H6g06407 | C2H6g23992 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| CX6g041455 | 6:2,298,064-2,298,429 | + | C1H6g29691 | C2H6g09872 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| CX6g043465 | 6:2,300,620-2,301,100 | + | C1H6g13605 | C2H6g19375 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| CX6g041165 | 6:2,302,652-2,310,361 | + | C1H6g01052 | C2H6g03223 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| CX6g041162 | 6:2,312,464-2,315,764 | + | C1H6g08202 | C2H6g20805 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| CX6g044558 | 6:2,318,504-2,324,599 | + | C1H6g28677 | C2H6g18246 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| CX6g044801 | 6:2,325,680-2,329,502 | - | C1H6g07185 | C2H6g22243 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| CX6g043926 | 6:2,332,720-2,333,148 | + | - | - | LOC_Os06g08700 | - | - | Detail |
| CX6g045279 | 6:2,333,467-2,337,321 | - | C1H6g00361 | C2H6g03461 | LOC_Os06g06390 | Os06g0158400 | - | Detail |
| CX6g045460 | 6:2,345,579-2,348,148 | - | C1H6g29953 | C2H6g18686 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| CX6g044562 | 6:2,351,694-2,352,623 | + | - | C2H6g00327 | LOC_Os06g06430 | Os06g0158800 | - | Detail |
| CX6g041204 | 6:2,353,882-2,361,660 | - | C1H6g02873 | C2H6g14590 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |