| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24311 | 4:10,566,603-10,568,247 | + | C1H4g11794 | CX4g034429 | - | - | - | Detail |
| C2H4g27929 | 4:10,598,685-10,602,983 | - | C1H4g21305 | CX4g035189 | - | Os04g0283900 | - | Detail |
| C2H4g30129 | 4:10,607,243-10,613,887 | - | C1H4g30260 | CX4g036385 | LOC_Os04g21610 | Os04g0284100 | - | Detail |
| C2H4g28829 | 4:10,625,747-10,634,435 | + | C1H4g19039 | - | - | - | - | Detail |
| C2H4g17225 | 4:10,635,279-10,642,364 | - | C1H4g31060 | CX4g031399 | LOC_Os04g21660 | Os04g0284600 | - | Detail |
| C2H4g05089 | 4:10,651,115-10,653,444 | - | C1H4g08612 | CX4g036320 | LOC_Os04g21710 | Os04g0284900 | - | Detail |
| C2H4g02465 | 4:10,660,103-10,662,465 | - | - | CX4g032537 | - | - | - | Detail |
| C2H4g29131 | 4:10,734,997-10,735,460 | + | C1H4g11497 | CX4g034311 | LOC_Os04g21790 | Os04g0286300 | - | Detail |
| C2H4g21060 | 4:10,753,742-10,756,324 | + | C1H4g07976 | CX4g033406 | LOC_Os04g21790 | Os04g0286300 | - | Detail |
| C2H4g08832 | 4:10,825,605-10,830,023 | + | C1H4g07699 | CX4g034311 | LOC_Os04g21820 | Os04g0307900 | - | Detail |
| C2H4g12565 | 4:10,848,488-10,849,555 | + | C1H4g02516 | CX4g035650 | LOC_Os04g21880 | Os04g0463800 | - | Detail |
| C2H4g13769 | 4:10,849,602-10,850,579 | + | C1H4g14312 | CX4g036672 | LOC_Os04g21880 | Os04g0469400 | - | Detail |
| C2H4g22174 | 4:10,895,575-10,896,707 | + | C1H4g26329 | CX4g034268 | LOC_Os04g21950 | Os04g0287400 | WRKY51, OsWRKY51 | Detail |
| C2H4g16248 | 4:10,953,851-10,954,720 | - | C1H4g05917 | CX4g033258 | LOC_Os04g22080 | Os04g0288100 | - | Detail |
| C2H4g23043 | 4:10,991,873-10,993,060 | - | C1H4g27160 | CX4g032513 | LOC_Os04g22120 | Os04g0288500 | - | Detail |
| C2H4g29101 | 4:10,995,373-10,996,951 | - | C1H4g28277 | CX4g032513 | LOC_Os04g22120 | Os04g0288500 | - | Detail |
| C2H4g20140 | 4:11,039,130-11,044,020 | + | C1H4g23795 | CX4g034060 | LOC_Os04g22240 | Os04g0289800 | - | Detail |
| C2H4g28831 | 4:11,090,231-11,096,090 | + | C1H4g25540 | CX4g032411 | LOC_Os04g22360 | Os04g0290800 | OsRUS1 | Detail |
| C2H4g03660 | 4:11,102,171-11,102,377 | + | C1H4g12809 | CX4g031738 | LOC_Os04g22390 | Os04g0291000 | - | Detail |
| C2H4g30508 | 4:11,106,438-11,111,145 | + | C1H4g12809 | CX4g035342 | LOC_Os04g22380 | Os04g0291100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041280 | 6:2,087,541-2,091,016 | - | C1H6g02689 | C2H6g27286 | LOC_Os06g05940 | Os06g0152700 | - | Detail |
| CX6g042365 | 6:2,093,928-2,096,030 | - | C1H6g04408 | C2H6g01251 | LOC_Os06g05950 | Os06g0152800 | - | Detail |
| CX6g041218 | 6:2,102,294-2,102,599 | + | - | C2H6g14215 | LOC_Os06g05960 | Os06g0153000 | - | Detail |
| CX6g043708 | 6:2,111,695-2,116,167 | + | C1H6g31171 | C2H6g12833 | LOC_Os06g05980 | Os06g0153200 | - | Detail |
| CX6g043348 | 6:2,118,005-2,119,480 | - | C1H6g01523 | C2H6g20090 | LOC_Os06g06014 | Os06g0153600 | - | Detail |
| CX6g041899 | 6:2,120,429-2,123,069 | - | C1H6g00846 | C2H6g26110 | LOC_Os06g06030 | Os06g0153800 | - | Detail |
| CX6g041423 | 6:2,124,486-2,127,885 | - | C1H6g29367 | C2H6g22332 | LOC_Os06g06040 | Os06g0153900 | - | Detail |
| CX6g044501 | 6:2,133,315-2,135,483 | + | - | C2H6g24996 | LOC_Os06g06050 | Os06g0154200 | - | Detail |
| CX6g044872 | 6:2,146,280-2,149,144 | + | C1H6g13844 | C2H6g00988 | LOC_Os06g06080 | Os06g0154400 | - | Detail |
| CX6g041992 | 6:2,150,253-2,156,094 | - | C1H6g10274 | C2H6g05005 | LOC_Os06g06090 | Os06g0154500 | MAPK6, OsMAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, DSG1 | Detail |
| CX6g042394 | 6:2,165,328-2,168,662 | + | C1H6g27505 | C2H6g06631 | LOC_Os06g06120 | Os06g0154900 | - | Detail |
| CX6g044821 | 6:2,169,113-2,174,033 | - | C1H6g05877 | C2H6g04407 | LOC_Os06g06130 | Os06g0190800 | - | Detail |
| CX6g043800 | 6:2,178,936-2,179,175 | - | C1H6g09350 | C2H6g24158 | LOC_Os06g06150 | Os06g0192800 | OsATL69 | Detail |
| CX6g044552 | 6:2,186,180-2,189,498 | + | C1H6g15508 | C2H6g13926 | LOC_Os06g06160 | Os06g0155300 | - | Detail |
| CX6g044116 | 6:2,193,484-2,194,978 | - | C1H6g19985 | C2H6g19143 | LOC_Os06g06170 | Os06g0155400 | - | Detail |
| CX6g045416 | 6:2,208,225-2,212,513 | - | C1H6g23710 | C2H6g23982 | LOC_Os06g06180 | Os06g0155500 | - | Detail |
| CX6g041578 | 6:2,212,856-2,216,628 | + | C1H6g22623 | C2H6g30621 | LOC_Os06g06190 | Os06g0155600 | - | Detail |
| CX6g044913 | 6:2,219,235-2,219,561 | + | C1H6g11905 | C2H6g16764 | - | Os06g0155750 | - | Detail |
| CX6g044141 | 6:2,226,302-2,229,334 | + | C1H6g12442 | C2H6g09339 | LOC_Os06g06210 | Os06g0155900 | - | Detail |
| CX6g042844 | 6:2,229,886-2,230,370 | + | C1H6g00599 | C2H6g14148 | LOC_Os06g06220 | - | - | Detail |