| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g28411 | 3:9,240,532-9,246,895 | - | C1H3g23179 | CX3g027965 | LOC_Os03g18710 | Os03g0298700 | - | Detail |
| C2H3g22544 | 3:9,248,494-9,252,558 | - | C1H3g30107 | CX3g028856 | LOC_Os03g18720 | Os03g0298800 | - | Detail |
| C2H3g15045 | 3:9,264,581-9,265,768 | + | C1H3g08723 | CX3g029271 | LOC_Os03g18740 | Os03g0299200 | - | Detail |
| C2H3g09178 | 3:9,278,981-9,279,901 | - | C1H3g20574 | CX3g025577 | LOC_Os03g18770 | Os03g0299600 | - | Detail |
| C2H3g30408 | 3:9,288,260-9,293,108 | - | C1H3g08338 | CX3g025927 | LOC_Os03g18790 | Os03g0299800 | - | Detail |
| C2H3g01680 | 3:9,300,538-9,303,854 | + | C1H3g29390 | CX3g025303 | LOC_Os03g18810 | Os03g0299900 | - | Detail |
| C2H3g29698 | 3:9,305,262-9,306,608 | - | C1H3g08396 | CX3g025517 | LOC_Os03g18820 | Os03g0300000 | - | Detail |
| C2H3g28163 | 3:9,309,510-9,313,862 | - | C1H3g18508 | CX3g030992 | LOC_Os03g18830 | Os03g0300200 | - | Detail |
| C2H3g21841 | 3:9,313,891-9,319,684 | + | C1H3g23407 | CX3g030790 | LOC_Os03g18840 | Os03g0300300 | - | Detail |
| C2H3g29151 | 3:9,320,346-9,321,399 | + | C1H3g17735 | CX3g027983 | LOC_Os03g18850 | Os03g0300400 | JIOsPR10 | Detail |
| C2H3g16892 | 3:9,323,452-9,325,149 | - | C1H3g06825 | CX3g030884 | LOC_Os03g18860 | Os03g0300500 | - | Detail |
| C2H3g14772 | 3:9,328,774-9,329,751 | - | C1H3g14250 | CX3g030255 | LOC_Os03g18870 | Os03g0300600 | - | Detail |
| C2H3g30255 | 3:9,332,917-9,334,022 | - | C1H3g00200 | CX3g030501 | LOC_Os03g18880 | Os03g0300700 | - | Detail |
| C2H3g17031 | 3:9,339,566-9,341,275 | + | C1H3g08826 | CX3g028981 | LOC_Os03g18890 | Os03g0300900 | - | Detail |
| C2H3g21070 | 3:9,358,176-9,360,191 | + | C1H3g12713 | CX3g030388 | LOC_Os03g18910 | Os03g0301200 | - | Detail |
| C2H3g13460 | 3:9,365,870-9,371,894 | + | C1H3g28323 | CX3g027587 | LOC_Os03g18940 | Os03g0301400 | - | Detail |
| C2H3g01957 | 3:9,374,145-9,376,152 | + | C1H3g10793 | CX3g029287 | LOC_Os03g18950 | Os03g0301500 | - | Detail |
| C2H3g01576 | 3:9,378,347-9,381,434 | + | C1H3g07825 | CX3g028454 | LOC_Os03g18960 | Os03g0301600 | - | Detail |
| C2H3g21248 | 3:9,382,284-9,385,967 | - | C1H3g28727 | CX3g025125 | LOC_Os03g18970 | Os03g0301700 | - | Detail |
| C2H3g22040 | 3:9,391,479-9,397,574 | - | C1H3g15707 | CX3g025499 | LOC_Os03g18980 | Os03g0301800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041280 | 6:2,087,541-2,091,016 | - | C1H6g02689 | C2H6g27286 | LOC_Os06g05940 | Os06g0152700 | - | Detail |
| CX6g042365 | 6:2,093,928-2,096,030 | - | C1H6g04408 | C2H6g01251 | LOC_Os06g05950 | Os06g0152800 | - | Detail |
| CX6g041218 | 6:2,102,294-2,102,599 | + | - | C2H6g14215 | LOC_Os06g05960 | Os06g0153000 | - | Detail |
| CX6g043708 | 6:2,111,695-2,116,167 | + | C1H6g31171 | C2H6g12833 | LOC_Os06g05980 | Os06g0153200 | - | Detail |
| CX6g043348 | 6:2,118,005-2,119,480 | - | C1H6g01523 | C2H6g20090 | LOC_Os06g06014 | Os06g0153600 | - | Detail |
| CX6g041899 | 6:2,120,429-2,123,069 | - | C1H6g00846 | C2H6g26110 | LOC_Os06g06030 | Os06g0153800 | - | Detail |
| CX6g041423 | 6:2,124,486-2,127,885 | - | C1H6g29367 | C2H6g22332 | LOC_Os06g06040 | Os06g0153900 | - | Detail |
| CX6g044501 | 6:2,133,315-2,135,483 | + | - | C2H6g24996 | LOC_Os06g06050 | Os06g0154200 | - | Detail |
| CX6g044872 | 6:2,146,280-2,149,144 | + | C1H6g13844 | C2H6g00988 | LOC_Os06g06080 | Os06g0154400 | - | Detail |
| CX6g041992 | 6:2,150,253-2,156,094 | - | C1H6g10274 | C2H6g05005 | LOC_Os06g06090 | Os06g0154500 | MAPK6, OsMAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, DSG1 | Detail |
| CX6g042394 | 6:2,165,328-2,168,662 | + | C1H6g27505 | C2H6g06631 | LOC_Os06g06120 | Os06g0154900 | - | Detail |
| CX6g044821 | 6:2,169,113-2,174,033 | - | C1H6g05877 | C2H6g04407 | LOC_Os06g06130 | Os06g0190800 | - | Detail |
| CX6g043800 | 6:2,178,936-2,179,175 | - | C1H6g09350 | C2H6g24158 | LOC_Os06g06150 | Os06g0192800 | OsATL69 | Detail |
| CX6g044552 | 6:2,186,180-2,189,498 | + | C1H6g15508 | C2H6g13926 | LOC_Os06g06160 | Os06g0155300 | - | Detail |
| CX6g044116 | 6:2,193,484-2,194,978 | - | C1H6g19985 | C2H6g19143 | LOC_Os06g06170 | Os06g0155400 | - | Detail |
| CX6g045416 | 6:2,208,225-2,212,513 | - | C1H6g23710 | C2H6g23982 | LOC_Os06g06180 | Os06g0155500 | - | Detail |
| CX6g041578 | 6:2,212,856-2,216,628 | + | C1H6g22623 | C2H6g30621 | LOC_Os06g06190 | Os06g0155600 | - | Detail |
| CX6g044913 | 6:2,219,235-2,219,561 | + | C1H6g11905 | C2H6g16764 | - | Os06g0155750 | - | Detail |
| CX6g044141 | 6:2,226,302-2,229,334 | + | C1H6g12442 | C2H6g09339 | LOC_Os06g06210 | Os06g0155900 | - | Detail |
| CX6g042844 | 6:2,229,886-2,230,370 | + | C1H6g00599 | C2H6g14148 | LOC_Os06g06220 | - | - | Detail |