| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21284 | 3:7,667,753-7,671,804 | + | C1H3g22318 | CX3g026411 | LOC_Os03g15840 | Os03g0265100 | PLS2, OsSQD2.3 | Detail |
| C2H3g07665 | 3:7,672,340-7,674,569 | - | C1H3g16209 | CX3g026305 | LOC_Os03g15850 | Os03g0265200 | - | Detail |
| C2H3g25611 | 3:7,677,527-7,680,546 | + | C1H3g16456 | CX3g029962 | LOC_Os03g15860 | Os03g0265300 | - | Detail |
| C2H3g15049 | 3:7,681,236-7,683,651 | + | C1H3g27080 | CX3g031298 | LOC_Os03g15870 | Os03g0265400 | - | Detail |
| C2H3g28537 | 3:7,692,151-7,694,983 | + | C1H3g26269 | CX3g025675 | LOC_Os03g15880 | Os03g0265500 | - | Detail |
| C2H3g24360 | 3:7,695,721-7,698,500 | - | C1H3g21286 | CX3g026951 | LOC_Os03g17060 | Os03g0265600 | - | Detail |
| C2H3g26554 | 3:7,701,539-7,712,106 | + | C1H3g15389 | CX3g030826 | LOC_Os03g15900 | Os03g0265700 | - | Detail |
| C2H3g04049 | 3:7,712,519-7,712,920 | + | C1H3g08685 | CX3g031044 | LOC_Os03g15910 | Os03g0265800 | - | Detail |
| C2H3g14157 | 3:7,713,212-7,714,578 | - | C1H3g02041 | CX3g030541 | LOC_Os03g15920 | Os03g0265900 | - | Detail |
| C2H3g30510 | 3:7,714,652-7,718,745 | + | C1H3g28556 | CX3g030784 | LOC_Os03g15930 | Os03g0266000 | - | Detail |
| C2H3g30669 | 3:7,721,019-7,722,939 | + | C1H3g03702 | CX3g027155 | LOC_Os03g15940 | Os03g0266100 | - | Detail |
| C2H3g06090 | 3:7,723,669-7,728,406 | - | C1H3g31409 | CX3g027025 | LOC_Os03g15950 | Os03g0266200 | - | Detail |
| C2H3g29477 | 3:7,728,940-7,729,425 | + | C1H3g24708 | CX3g028400 | LOC_Os03g15960 | Os03g0266300 | - | Detail |
| C2H3g08789 | 3:7,748,967-7,749,992 | - | C1H3g06192 | CX3g030422 | - | Os03g0666100 | - | Detail |
| C2H3g22167 | 3:7,759,717-7,764,832 | + | C1H3g06417 | CX3g028150 | LOC_Os03g16000 | Os03g0266700 | - | Detail |
| C2H3g11836 | 3:7,766,624-7,772,643 | + | C1H3g07398 | CX3g028162 | LOC_Os03g16010 | Os03g0266800 | - | Detail |
| C2H3g11139 | 3:7,776,675-7,777,148 | - | C1H3g14734 | CX3g027615 | LOC_Os03g16040 | Os03g0267200 | sHSP17.7, OSHSP17.7 | Detail |
| C2H3g24515 | 3:7,778,811-7,780,663 | - | C1H3g06904 | CX3g026398 | LOC_Os03g16050 | Os03g0267300 | - | Detail |
| C2H3g00254 | 3:7,789,712-7,792,803 | + | C1H3g31620 | CX3g030412 | LOC_Os03g16060 | Os03g0267500 | - | Detail |
| C2H3g01773 | 3:7,792,856-7,797,735 | - | C1H3g27649 | CX3g027859 | LOC_Os03g16070 | Os03g0267600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041280 | 6:2,087,541-2,091,016 | - | C1H6g02689 | C2H6g27286 | LOC_Os06g05940 | Os06g0152700 | - | Detail |
| CX6g042365 | 6:2,093,928-2,096,030 | - | C1H6g04408 | C2H6g01251 | LOC_Os06g05950 | Os06g0152800 | - | Detail |
| CX6g041218 | 6:2,102,294-2,102,599 | + | - | C2H6g14215 | LOC_Os06g05960 | Os06g0153000 | - | Detail |
| CX6g043708 | 6:2,111,695-2,116,167 | + | C1H6g31171 | C2H6g12833 | LOC_Os06g05980 | Os06g0153200 | - | Detail |
| CX6g043348 | 6:2,118,005-2,119,480 | - | C1H6g01523 | C2H6g20090 | LOC_Os06g06014 | Os06g0153600 | - | Detail |
| CX6g041899 | 6:2,120,429-2,123,069 | - | C1H6g00846 | C2H6g26110 | LOC_Os06g06030 | Os06g0153800 | - | Detail |
| CX6g041423 | 6:2,124,486-2,127,885 | - | C1H6g29367 | C2H6g22332 | LOC_Os06g06040 | Os06g0153900 | - | Detail |
| CX6g044501 | 6:2,133,315-2,135,483 | + | - | C2H6g24996 | LOC_Os06g06050 | Os06g0154200 | - | Detail |
| CX6g044872 | 6:2,146,280-2,149,144 | + | C1H6g13844 | C2H6g00988 | LOC_Os06g06080 | Os06g0154400 | - | Detail |
| CX6g041992 | 6:2,150,253-2,156,094 | - | C1H6g10274 | C2H6g05005 | LOC_Os06g06090 | Os06g0154500 | MAPK6, OsMAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, DSG1 | Detail |
| CX6g042394 | 6:2,165,328-2,168,662 | + | C1H6g27505 | C2H6g06631 | LOC_Os06g06120 | Os06g0154900 | - | Detail |
| CX6g044821 | 6:2,169,113-2,174,033 | - | C1H6g05877 | C2H6g04407 | LOC_Os06g06130 | Os06g0190800 | - | Detail |
| CX6g043800 | 6:2,178,936-2,179,175 | - | C1H6g09350 | C2H6g24158 | LOC_Os06g06150 | Os06g0192800 | OsATL69 | Detail |
| CX6g044552 | 6:2,186,180-2,189,498 | + | C1H6g15508 | C2H6g13926 | LOC_Os06g06160 | Os06g0155300 | - | Detail |
| CX6g044116 | 6:2,193,484-2,194,978 | - | C1H6g19985 | C2H6g19143 | LOC_Os06g06170 | Os06g0155400 | - | Detail |
| CX6g045416 | 6:2,208,225-2,212,513 | - | C1H6g23710 | C2H6g23982 | LOC_Os06g06180 | Os06g0155500 | - | Detail |
| CX6g041578 | 6:2,212,856-2,216,628 | + | C1H6g22623 | C2H6g30621 | LOC_Os06g06190 | Os06g0155600 | - | Detail |
| CX6g044913 | 6:2,219,235-2,219,561 | + | C1H6g11905 | C2H6g16764 | - | Os06g0155750 | - | Detail |
| CX6g044141 | 6:2,226,302-2,229,334 | + | C1H6g12442 | C2H6g09339 | LOC_Os06g06210 | Os06g0155900 | - | Detail |
| CX6g042844 | 6:2,229,886-2,230,370 | + | C1H6g00599 | C2H6g14148 | LOC_Os06g06220 | - | - | Detail |