| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g20543 | 3:1,614,850-1,617,133 | + | C2H3g29451 | CX3g030865 | LOC_Os03g03890 | Os03g0131000 | - | Detail |
| C1H3g20869 | 3:1,617,782-1,622,965 | - | C2H3g00921 | CX3g029241 | LOC_Os03g03900 | Os03g0131100 | OsNLP1 | Detail |
| C1H3g01716 | 3:1,627,947-1,628,354 | + | - | - | - | - | - | Detail |
| C1H3g07647 | 3:1,628,836-1,629,228 | + | - | - | - | - | - | Detail |
| C1H3g21207 | 3:1,630,393-1,633,428 | - | C2H3g05397 | CX3g027343 | LOC_Os03g03910 | Os03g0131200 | - | Detail |
| C1H3g29193 | 3:1,634,240-1,639,738 | - | C2H3g25663 | CX3g027343 | LOC_Os03g03920 | Os03g0131300 | - | Detail |
| C1H3g04201 | 3:1,641,297-1,646,965 | - | C2H3g07948 | CX3g029745 | LOC_Os03g03930 | Os03g0131400 | - | Detail |
| C1H3g28233 | 3:1,647,139-1,650,167 | + | C2H3g06029 | CX3g026999 | LOC_Os03g03949 | Os03g0131500 | - | Detail |
| C1H3g02854 | 3:1,651,001-1,652,057 | + | C2H3g05494 | CX3g028529 | LOC_Os03g03980 | Os03g0131800 | - | Detail |
| C1H3g31581 | 3:1,653,204-1,654,370 | - | C2H3g22495 | CX3g029556 | LOC_Os03g03990 | Os03g0131900 | OscpSRP43, cpSRP43 | Detail |
| C1H3g06072 | 3:1,657,769-1,661,602 | + | C2H3g11143 | CX3g026513 | LOC_Os03g04000 | Os03g0132000 | - | Detail |
| C1H3g07116 | 3:1,669,602-1,671,436 | + | C2H3g03337 | CX3g026620 | LOC_Os03g04020 | Os03g0132200 | - | Detail |
| C1H3g18409 | 3:1,675,184-1,678,381 | - | C2H3g07678 | CX3g028694 | LOC_Os03g04030 | Os03g0132300 | - | Detail |
| C1H3g11603 | 3:1,693,890-1,698,703 | + | C2H3g02332 | CX3g030334 | LOC_Os03g04050 | Os03g0132800 | OsBSK1-1 | Detail |
| C1H3g08655 | 3:1,701,202-1,702,185 | + | - | CX3g028275 | LOC_Os03g04060 | Os03g0132900 | - | Detail |
| C1H3g17948 | 3:1,703,247-1,704,773 | - | C2H3g25865 | CX3g030345 | LOC_Os03g04070 | Os03g0133000 | NAC22, ONAC022 | Detail |
| C1H3g06331 | 3:1,712,010-1,712,357 | + | C2H3g07517 | CX3g030686 | LOC_Os03g04080 | Os03g0133100 | - | Detail |
| C1H3g07259 | 3:1,713,085-1,716,579 | - | - | CX3g026302 | - | - | - | Detail |
| C1H3g25947 | 3:1,716,856-1,720,783 | + | C2H3g25074 | CX3g029725 | LOC_Os03g04100 | Os03g0133300 | ESV1, Os-ESV1, LA3 | Detail |
| C1H3g11058 | 3:1,721,907-1,723,340 | + | C2H3g16071 | CX3g025596 | LOC_Os03g04110 | Os03g0133400 | CEBiP, OsCEBiP | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041280 | 6:2,087,541-2,091,016 | - | C1H6g02689 | C2H6g27286 | LOC_Os06g05940 | Os06g0152700 | - | Detail |
| CX6g042365 | 6:2,093,928-2,096,030 | - | C1H6g04408 | C2H6g01251 | LOC_Os06g05950 | Os06g0152800 | - | Detail |
| CX6g041218 | 6:2,102,294-2,102,599 | + | - | C2H6g14215 | LOC_Os06g05960 | Os06g0153000 | - | Detail |
| CX6g043708 | 6:2,111,695-2,116,167 | + | C1H6g31171 | C2H6g12833 | LOC_Os06g05980 | Os06g0153200 | - | Detail |
| CX6g043348 | 6:2,118,005-2,119,480 | - | C1H6g01523 | C2H6g20090 | LOC_Os06g06014 | Os06g0153600 | - | Detail |
| CX6g041899 | 6:2,120,429-2,123,069 | - | C1H6g00846 | C2H6g26110 | LOC_Os06g06030 | Os06g0153800 | - | Detail |
| CX6g041423 | 6:2,124,486-2,127,885 | - | C1H6g29367 | C2H6g22332 | LOC_Os06g06040 | Os06g0153900 | - | Detail |
| CX6g044501 | 6:2,133,315-2,135,483 | + | - | C2H6g24996 | LOC_Os06g06050 | Os06g0154200 | - | Detail |
| CX6g044872 | 6:2,146,280-2,149,144 | + | C1H6g13844 | C2H6g00988 | LOC_Os06g06080 | Os06g0154400 | - | Detail |
| CX6g041992 | 6:2,150,253-2,156,094 | - | C1H6g10274 | C2H6g05005 | LOC_Os06g06090 | Os06g0154500 | MAPK6, OsMAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, DSG1 | Detail |
| CX6g042394 | 6:2,165,328-2,168,662 | + | C1H6g27505 | C2H6g06631 | LOC_Os06g06120 | Os06g0154900 | - | Detail |
| CX6g044821 | 6:2,169,113-2,174,033 | - | C1H6g05877 | C2H6g04407 | LOC_Os06g06130 | Os06g0190800 | - | Detail |
| CX6g043800 | 6:2,178,936-2,179,175 | - | C1H6g09350 | C2H6g24158 | LOC_Os06g06150 | Os06g0192800 | OsATL69 | Detail |
| CX6g044552 | 6:2,186,180-2,189,498 | + | C1H6g15508 | C2H6g13926 | LOC_Os06g06160 | Os06g0155300 | - | Detail |
| CX6g044116 | 6:2,193,484-2,194,978 | - | C1H6g19985 | C2H6g19143 | LOC_Os06g06170 | Os06g0155400 | - | Detail |
| CX6g045416 | 6:2,208,225-2,212,513 | - | C1H6g23710 | C2H6g23982 | LOC_Os06g06180 | Os06g0155500 | - | Detail |
| CX6g041578 | 6:2,212,856-2,216,628 | + | C1H6g22623 | C2H6g30621 | LOC_Os06g06190 | Os06g0155600 | - | Detail |
| CX6g044913 | 6:2,219,235-2,219,561 | + | C1H6g11905 | C2H6g16764 | - | Os06g0155750 | - | Detail |
| CX6g044141 | 6:2,226,302-2,229,334 | + | C1H6g12442 | C2H6g09339 | LOC_Os06g06210 | Os06g0155900 | - | Detail |
| CX6g042844 | 6:2,229,886-2,230,370 | + | C1H6g00599 | C2H6g14148 | LOC_Os06g06220 | - | - | Detail |