| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g08969 | 4:13,218,956-13,221,228 | + | C2H4g25025 | CX4g036238 | LOC_Os04g27990 | Os04g0346900 | - | Detail |
| C1H4g15107 | 4:13,225,358-13,232,659 | + | C2H4g18236 | CX4g033642 | LOC_Os04g28010 | Os04g0347600 | - | Detail |
| C1H4g05294 | 4:13,237,937-13,242,997 | - | - | - | - | - | - | Detail |
| C1H4g03410 | 4:13,478,427-13,482,579 | - | C2H6g18608 | CX6g044432 | - | Os12g0632401 | - | Detail |
| C1H4g19418 | 4:13,536,308-13,543,244 | + | C2H4g16562 | CX4g032157 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| C1H4g22332 | 4:13,551,105-13,556,761 | + | C2H4g25578 | CX4g033951 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| C1H4g13797 | 4:13,559,425-13,564,556 | + | C2H4g20901 | CX4g033086 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| C1H4g24314 | 4:13,563,743-13,566,873 | - | C2H4g08837 | CX4g034188 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| C1H4g16463 | 4:13,574,904-13,582,287 | + | C2H4g13837 | CX4g035633 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| C1H4g18035 | 4:13,586,454-13,589,500 | - | C2H4g14798 | CX4g036157 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| C1H4g07136 | 4:13,598,759-13,601,214 | + | C2H4g14319 | - | LOC_Os04g28120 | Os04g0348600 | - | Detail |
| C1H4g27011 | 4:13,610,302-13,613,546 | + | C2H4g18470 | - | LOC_Os04g28130 | Os04g0348800 | - | Detail |
| C1H4g23299 | 4:13,626,130-13,629,312 | + | C2H4g29280 | - | LOC_Os04g28160 | Os04g0348800 | - | Detail |
| C1H4g18144 | 4:13,635,805-13,639,280 | - | C2H4g00376 | CX4g035408 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| C1H4g07697 | 4:13,641,848-13,643,962 | - | C2H4g26754 | CX4g032516 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| C1H4g08997 | 4:13,661,222-13,666,019 | - | C2H4g11001 | CX4g034310 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| C1H4g05397 | 4:13,678,190-13,680,673 | + | C2H4g17175 | CX4g034236 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| C1H4g22441 | 4:13,698,927-13,706,233 | + | C2H4g23045 | CX4g035357 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| C1H4g22936 | 4:13,724,316-13,727,239 | - | C2H4g11650 | CX4g032228 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| C1H4g19111 | 4:13,731,769-13,732,047 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044380 | 6:1,799,845-1,801,828 | + | C1H6g00499 | C2H6g06407 | LOC_Os06g05300 | Os06g0145300 | - | Detail |
| CX6g044398 | 6:1,802,776-1,810,740 | + | C1H6g27412 | C2H6g10577 | LOC_Os06g05310 | Os06g0145600 | - | Detail |
| CX6g044776 | 6:1,812,541-1,815,278 | - | C1H6g28860 | C2H6g26989 | LOC_Os06g05340 | Os06g0145700 | OsWRI4, OsWRI5a | Detail |
| CX6g041367 | 6:1,818,057-1,820,342 | + | C1H6g04809 | C2H6g09415 | LOC_Os06g05350 | Os06g0145800 | OsWHY1 | Detail |
| CX6g045545 | 6:1,821,933-1,826,007 | + | C1H6g06658 | C2H6g30158 | LOC_Os06g05359 | Os06g0146100 | - | Detail |
| CX6g043056 | 6:1,830,112-1,830,285 | + | - | - | - | - | - | Detail |
| CX6g042551 | 6:1,837,190-1,842,429 | + | C1H6g10315 | C2H6g10065 | LOC_Os06g05380 | Os06g0146250 | - | Detail |
| CX6g044514 | 6:1,843,015-1,846,392 | - | C1H6g01868 | C2H6g11563 | LOC_Os06g05390 | Os06g0146300 | - | Detail |
| CX6g043905 | 6:1,847,026-1,848,863 | - | C1H6g20638 | C2H6g22438 | LOC_Os06g05400 | Os06g0146400 | - | Detail |
| CX6g043976 | 6:1,850,817-1,851,206 | + | - | C2H6g23097 | - | Os06g0146650 | - | Detail |
| CX6g045184 | 6:1,891,562-1,895,242 | - | C1H6g26195 | C2H6g25201 | LOC_Os06g05520 | Os06g0147800 | OsMKK1 | Detail |
| CX6g044845 | 6:1,899,742-1,902,672 | - | C1H6g30016 | C2H6g23587 | LOC_Os06g05530 | Os06g0148000 | - | Detail |
| CX6g045738 | 6:1,904,053-1,904,634 | + | - | C2H6g14002 | LOC_Os06g05540 | Os06g0148100 | - | Detail |
| CX6g042295 | 6:1,909,046-1,910,863 | + | C1H6g15370 | C2H6g12987 | LOC_Os06g05550 | Os06g0148200 | - | Detail |
| CX6g041906 | 6:1,912,708-1,917,672 | + | C1H6g07577 | C2H6g05508 | LOC_Os06g05560 | Os06g0148300 | - | Detail |
| CX6g043676 | 6:1,925,553-1,929,738 | + | C1H6g29176 | C2H6g17289 | LOC_Os06g05600 | Os06g0148900 | - | Detail |
| CX6g042404 | 6:1,936,516-1,938,376 | + | C1H6g09526 | C2H6g26996 | LOC_Os06g05630 | Os06g0149100 | - | Detail |
| CX6g043655 | 6:1,940,551-1,944,438 | - | C1H6g12180 | C2H6g20749 | LOC_Os06g05640 | Os06g0149200 | - | Detail |
| CX6g043755 | 6:1,949,003-1,952,780 | + | C1H6g15189 | C2H6g19535 | LOC_Os06g05660 | Os06g0149400 | - | Detail |
| CX6g045419 | 6:1,954,276-1,956,411 | + | C1H6g02447 | C2H6g04120 | LOC_Os06g05670 | Os06g0149500 | - | Detail |