| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02659 | 2:21,650,013-21,652,314 | + | C1H2g31252 | CX2g021015 | LOC_Os02g38040 | Os02g0593600 | OsIRL2 | Detail |
| C2H2g02107 | 2:21,652,904-21,658,629 | - | C1H2g28738 | CX2g022113 | LOC_Os02g38050 | Os02g0593700 | - | Detail |
| C2H2g27414 | 2:21,662,462-21,666,899 | + | C1H2g05228 | CX2g022962 | LOC_Os02g38060 | Os02g0593900 | - | Detail |
| C2H2g28617 | 2:21,671,276-21,676,533 | + | C1H2g19613 | CX2g020918 | LOC_Os02g38080 | Os02g0594100 | - | Detail |
| C2H2g22920 | 2:21,706,647-21,709,519 | + | C1H2g26025 | CX2g022653 | LOC_Os02g38120 | Os02g0594700 | OsBTBN3 | Detail |
| C2H2g27568 | 2:21,725,819-21,728,861 | - | C1H2g03331 | CX2g023488 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| C2H2g08333 | 2:21,734,849-21,737,047 | - | C1H2g12247 | CX2g020733 | LOC_Os02g38160 | Os02g0594900 | - | Detail |
| C2H2g24282 | 2:21,748,043-21,751,282 | - | C1H2g09203 | CX2g024257 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| C2H2g12684 | 2:21,768,658-21,769,571 | - | C1H2g18043 | CX2g021227 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| C2H2g27779 | 2:21,773,593-21,777,440 | - | C1H2g28766 | CX2g023998 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| C2H2g13918 | 2:21,783,398-21,787,026 | + | C1H2g15529 | CX2g023123 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| C2H2g12990 | 2:21,788,231-21,789,893 | - | C1H2g13753 | CX2g024625 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| C2H2g05640 | 2:21,794,766-21,797,513 | - | C1H2g12816 | CX2g021096 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| C2H2g05424 | 2:21,799,545-21,808,652 | - | C1H2g21293 | CX2g020732 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| C2H2g17152 | 2:21,810,292-21,812,161 | + | C1H2g16769 | CX2g020902 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| C2H2g16801 | 2:21,813,661-21,815,350 | - | C1H2g16904 | - | - | - | - | Detail |
| C2H2g06504 | 2:21,815,761-21,817,377 | - | C1H2g00956 | CX2g024363 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| C2H2g01473 | 2:21,820,091-21,820,710 | - | - | - | - | - | - | Detail |
| C2H2g22627 | 2:21,823,310-21,826,480 | - | C1H2g15841 | CX2g024642 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| C2H2g25090 | 2:21,827,821-21,828,330 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045953 | 6:1,506,073-1,509,211 | - | C1H6g26349 | C2H6g23209 | LOC_Os06g04800 | Os06g0139900 | - | Detail |
| CX6g044242 | 6:1,521,508-1,524,462 | - | C1H6g18150 | C2H6g06933 | LOC_Os06g04830 | Os06g0140200 | OsRLP1 | Detail |
| CX6g045474 | 6:1,527,802-1,530,555 | - | C1H6g18150 | C2H6g30511 | LOC_Os06g04840 | Os06g0140300 | - | Detail |
| CX6g045909 | 6:1,538,108-1,538,314 | + | - | - | - | - | - | Detail |
| CX6g045336 | 6:1,539,455-1,540,337 | + | C1H6g12632 | C2H6g11310 | LOC_Os06g04850 | Os06g0140400 | - | Detail |
| CX6g042238 | 6:1,553,273-1,554,305 | + | C1H6g28945 | C2H6g12351 | LOC_Os06g04870 | Os06g0140700 | - | Detail |
| CX6g041483 | 6:1,555,949-1,561,755 | - | C1H6g16218 | C2H6g07431 | LOC_Os06g04880 | Os06g0140800 | - | Detail |
| CX6g042795 | 6:1,567,824-1,568,030 | - | - | C2H6g08771 | LOC_Os06g04889 | Os06g0140900 | - | Detail |
| CX6g042963 | 6:1,570,795-1,572,434 | - | C1H6g10901 | C2H6g06281 | LOC_Os06g04900 | Os06g0141100 | OsSTP19 | Detail |
| CX6g042744 | 6:1,573,644-1,576,337 | - | C1H6g22682 | C2H6g22276 | LOC_Os06g04910 | Os06g0141166 | - | Detail |
| CX6g044396 | 6:1,579,372-1,580,054 | - | C1H6g07568 | C2H6g22440 | LOC_Os06g04920 | Os06g0141200 | OsZFP1 | Detail |
| CX6g043146 | 6:1,601,897-1,606,381 | + | C1H6g19864 | C2H6g02748 | LOC_Os06g04970 | Os06g0142050 | - | Detail |
| CX6g044459 | 6:1,607,267-1,610,509 | + | C1H6g27997 | C2H6g19975 | LOC_Os06g04980 | Os06g0142100 | - | Detail |
| CX6g041298 | 6:1,630,710-1,634,159 | + | C1H6g25792 | C2H6g07918 | LOC_Os06g05050 | Os06g0142500 | - | Detail |
| CX6g042388 | 6:1,637,791-1,642,334 | - | C1H6g15035 | C2H6g07121 | LOC_Os06g05060 | Os06g0142600 | HD3B, Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3_chr.6 | Detail |
| CX6g042647 | 6:1,644,705-1,646,084 | - | C1H6g26949 | C2H6g10352 | LOC_Os06g05070 | Os06g0142650 | MAK4 | Detail |
| CX6g043519 | 6:1,647,069-1,649,548 | - | C1H6g04865 | C2H6g12414 | LOC_Os06g05080 | Os06g0142700 | - | Detail |
| CX6g045531 | 6:1,650,860-1,653,385 | + | C1H6g09936 | C2H6g05717 | LOC_Os06g05090 | Os06g0142800 | OsPRMT10 | Detail |
| CX6g043223 | 6:1,654,460-1,659,107 | - | C1H6g01773 | C2H6g27696 | LOC_Os06g05100 | Os06g0142900 | OsDXS2 | Detail |
| CX6g045678 | 6:1,659,881-1,662,284 | + | C1H6g13101 | C2H6g20262 | LOC_Os06g05110 | Os06g0143000 | OsFe-SOD, OsFe-SODb | Detail |