| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g26939 | 3:5,827,730-5,829,663 | + | C2H3g21341 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| C1H3g23318 | 3:5,830,907-5,831,606 | + | C2H3g03359 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| C1H3g17135 | 3:5,832,929-5,841,582 | + | C2H3g24748 | CX3g030046 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| C1H3g25680 | 3:5,842,305-5,848,977 | + | C2H3g09129 | CX3g028144 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| C1H3g10808 | 3:5,850,410-5,855,399 | + | C2H3g02566 | CX3g025098 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| C1H3g31142 | 3:5,859,958-5,861,394 | + | C2H3g16646 | CX3g026072 | LOC_Os03g12500 | Os03g0225900 | - | Detail |
| C1H3g02465 | 3:5,868,214-5,869,065 | - | C2H3g10692 | CX3g026153 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| C1H3g31559 | 3:5,870,535-5,872,232 | + | C2H3g15869 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C1H3g14266 | 3:5,872,381-5,872,951 | + | C2H3g08794 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C1H3g15877 | 3:5,878,805-5,883,431 | + | C2H3g29082 | CX3g027606 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| C1H3g27940 | 3:5,889,656-5,896,396 | + | C2H3g13286 | CX3g025975 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| C1H3g15687 | 3:5,897,248-5,899,040 | - | C2H3g30568 | CX3g027982 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| C1H3g18854 | 3:5,900,286-5,906,068 | + | C2H3g00790 | CX3g024984 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| C1H3g26728 | 3:5,907,227-5,910,038 | + | C2H3g22427 | CX3g027871 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| C1H3g26232 | 3:5,913,957-5,921,379 | + | C2H3g07335 | CX3g030829 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| C1H3g22048 | 3:5,923,945-5,931,937 | + | C2H3g16667 | CX3g026050 | LOC_Os03g12610 | Os03g0227300 | - | Detail |
| C1H3g19915 | 3:5,932,012-5,935,453 | - | C2H3g04602 | CX3g031339 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| C1H3g13701 | 3:5,949,947-5,953,406 | + | C2H3g27028 | CX3g027265 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| C1H3g10637 | 3:5,969,729-5,976,810 | + | C2H3g25912 | CX3g027504 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| C1H3g02053 | 3:5,978,556-5,981,087 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045953 | 6:1,506,073-1,509,211 | - | C1H6g26349 | C2H6g23209 | LOC_Os06g04800 | Os06g0139900 | - | Detail |
| CX6g044242 | 6:1,521,508-1,524,462 | - | C1H6g18150 | C2H6g06933 | LOC_Os06g04830 | Os06g0140200 | OsRLP1 | Detail |
| CX6g045474 | 6:1,527,802-1,530,555 | - | C1H6g18150 | C2H6g30511 | LOC_Os06g04840 | Os06g0140300 | - | Detail |
| CX6g045909 | 6:1,538,108-1,538,314 | + | - | - | - | - | - | Detail |
| CX6g045336 | 6:1,539,455-1,540,337 | + | C1H6g12632 | C2H6g11310 | LOC_Os06g04850 | Os06g0140400 | - | Detail |
| CX6g042238 | 6:1,553,273-1,554,305 | + | C1H6g28945 | C2H6g12351 | LOC_Os06g04870 | Os06g0140700 | - | Detail |
| CX6g041483 | 6:1,555,949-1,561,755 | - | C1H6g16218 | C2H6g07431 | LOC_Os06g04880 | Os06g0140800 | - | Detail |
| CX6g042795 | 6:1,567,824-1,568,030 | - | - | C2H6g08771 | LOC_Os06g04889 | Os06g0140900 | - | Detail |
| CX6g042963 | 6:1,570,795-1,572,434 | - | C1H6g10901 | C2H6g06281 | LOC_Os06g04900 | Os06g0141100 | OsSTP19 | Detail |
| CX6g042744 | 6:1,573,644-1,576,337 | - | C1H6g22682 | C2H6g22276 | LOC_Os06g04910 | Os06g0141166 | - | Detail |
| CX6g044396 | 6:1,579,372-1,580,054 | - | C1H6g07568 | C2H6g22440 | LOC_Os06g04920 | Os06g0141200 | OsZFP1 | Detail |
| CX6g043146 | 6:1,601,897-1,606,381 | + | C1H6g19864 | C2H6g02748 | LOC_Os06g04970 | Os06g0142050 | - | Detail |
| CX6g044459 | 6:1,607,267-1,610,509 | + | C1H6g27997 | C2H6g19975 | LOC_Os06g04980 | Os06g0142100 | - | Detail |
| CX6g041298 | 6:1,630,710-1,634,159 | + | C1H6g25792 | C2H6g07918 | LOC_Os06g05050 | Os06g0142500 | - | Detail |
| CX6g042388 | 6:1,637,791-1,642,334 | - | C1H6g15035 | C2H6g07121 | LOC_Os06g05060 | Os06g0142600 | HD3B, Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3_chr.6 | Detail |
| CX6g042647 | 6:1,644,705-1,646,084 | - | C1H6g26949 | C2H6g10352 | LOC_Os06g05070 | Os06g0142650 | MAK4 | Detail |
| CX6g043519 | 6:1,647,069-1,649,548 | - | C1H6g04865 | C2H6g12414 | LOC_Os06g05080 | Os06g0142700 | - | Detail |
| CX6g045531 | 6:1,650,860-1,653,385 | + | C1H6g09936 | C2H6g05717 | LOC_Os06g05090 | Os06g0142800 | OsPRMT10 | Detail |
| CX6g043223 | 6:1,654,460-1,659,107 | - | C1H6g01773 | C2H6g27696 | LOC_Os06g05100 | Os06g0142900 | OsDXS2 | Detail |
| CX6g045678 | 6:1,659,881-1,662,284 | + | C1H6g13101 | C2H6g20262 | LOC_Os06g05110 | Os06g0143000 | OsFe-SOD, OsFe-SODb | Detail |