| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01356 | 1:22,547,149-22,552,418 | + | C1H1g08197 | CX1g000972 | LOC_Os01g43870 | Os01g0629400 | - | Detail |
| C2H1g12475 | 1:22,555,116-22,555,352 | + | - | - | LOC_Os01g43880 | Os01g0629500 | - | Detail |
| C2H1g02903 | 1:22,558,803-22,559,798 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g15801 | 1:22,566,740-22,567,108 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g07937 | 1:22,570,471-22,576,655 | - | C1H1g14568 | CX1g006840 | LOC_Os01g43910 | Os01g0629900 | - | Detail |
| C2H1g22336 | 1:22,609,633-22,616,484 | + | C1H1g00799 | CX1g005258 | LOC_Os01g44040 | Os01g0631100 | - | Detail |
| C2H1g25630 | 1:22,617,364-22,620,467 | + | C1H1g26941 | CX1g002535 | LOC_Os01g44050 | Os01g0631200 | - | Detail |
| C2H1g14517 | 1:22,637,435-22,643,979 | + | C1H1g05926 | CX1g001624 | LOC_Os01g44069 | Os01g0631400 | - | Detail |
| C2H1g24347 | 1:22,651,516-22,652,365 | + | C1H1g08811 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C2H1g14152 | 1:22,675,518-22,679,990 | + | C1H1g07009 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C2H1g16370 | 1:22,684,091-22,692,095 | + | C1H1g05320 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C2H1g06740 | 1:22,707,438-22,709,297 | + | C1H1g12869 | - | - | - | - | Detail |
| C2H1g03548 | 1:22,722,911-22,723,426 | - | C1H1g13707 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C2H1g23506 | 1:22,728,196-22,734,469 | + | C1H1g09519 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C2H1g25610 | 1:22,736,618-22,740,433 | + | C1H1g25629 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C2H1g21259 | 1:22,742,692-22,745,124 | + | C1H1g17417 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C2H1g13154 | 1:22,750,032-22,751,941 | + | C1H1g26792 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C2H1g30459 | 1:22,755,586-22,762,743 | - | C1H1g26567 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C2H1g20909 | 1:22,774,885-22,776,872 | - | C1H1g01839 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C2H1g10174 | 1:22,778,406-22,779,964 | - | C1H1g04340 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043134 | 6:1,374,090-1,380,361 | - | C1H6g11836 | C2H6g14254 | LOC_Os06g04510 | Os06g0136600 | - | Detail |
| CX6g041242 | 6:1,381,925-1,392,675 | + | C1H6g12650 | C2H6g06858 | LOC_Os06g04520 | Os06g0136700 | - | Detail |
| CX6g041371 | 6:1,393,615-1,396,534 | + | C1H6g27183 | C2H6g29816 | LOC_Os06g04530 | Os06g0136800 | - | Detail |
| CX6g044427 | 6:1,405,898-1,406,884 | - | - | C2H6g07263 | LOC_Os06g04540 | Os06g0136900 | DP1 | Detail |
| CX6g041492 | 6:1,416,520-1,424,871 | - | C1H6g03718 | C2H6g26508 | LOC_Os06g04560 | Os06g0137100 | - | Detail |
| CX6g043677 | 6:1,425,850-1,426,038 | - | - | - | - | - | - | Detail |
| CX6g043823 | 6:1,430,097-1,433,398 | + | C1H6g00708 | C2H6g14543 | LOC_Os06g04580 | Os06g0137300 | OsYAF9 | Detail |
| CX6g045942 | 6:1,439,605-1,439,964 | + | C1H6g23167 | C2H6g11377 | LOC_Os06g04590 | Os06g0137400 | - | Detail |
| CX6g043470 | 6:1,443,161-1,448,322 | - | C1H6g03688 | C2H6g05549 | LOC_Os06g04600 | Os06g0137500 | - | Detail |
| CX6g042032 | 6:1,449,228-1,450,548 | + | C1H6g19756 | C2H6g21165 | LOC_Os06g04610 | Os06g0137600 | - | Detail |
| CX6g045659 | 6:1,457,358-1,458,488 | + | C1H6g26864 | C2H6g25322 | LOC_Os06g04620 | Os06g0137700 | - | Detail |
| CX6g042092 | 6:1,461,211-1,465,534 | + | C1H6g15651 | C2H6g11346 | LOC_Os06g04640 | Os06g0138000 | - | Detail |
| CX6g043067 | 6:1,466,261-1,467,972 | - | C1H6g27478 | C2H6g15488 | LOC_Os06g04650 | Os06g0138100 | - | Detail |
| CX6g041227 | 6:1,468,366-1,472,274 | + | C1H6g25263 | C2H6g16932 | LOC_Os06g04660 | Os06g0138200 | - | Detail |
| CX6g044072 | 6:1,474,601-1,475,614 | + | C1H6g22039 | C2H6g00635 | LOC_Os06g04670 | Os06g0138400 | - | Detail |
| CX6g043184 | 6:1,477,984-1,479,138 | - | - | C2H6g07751 | LOC_Os06g04680 | Os06g0138600 | - | Detail |
| CX6g044076 | 6:1,480,428-1,484,040 | + | C1H6g02705 | C2H6g23253 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| CX6g045363 | 6:1,486,400-1,486,645 | - | - | - | - | - | - | Detail |
| CX6g042246 | 6:1,487,641-1,490,795 | - | C1H6g03863 | C2H6g10016 | LOC_Os06g04710 | Os06g0139000 | DDF1 | Detail |
| CX6g044405 | 6:1,503,443-1,505,466 | + | C1H6g11816 | C2H6g16226 | LOC_Os06g04790 | Os06g0139800 | - | Detail |