| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23173 | 4:20,134,233-20,137,730 | + | C2H4g15046 | CX4g031560 | LOC_Os04g38870 | Os04g0462500 | - | Detail |
| C1H4g05269 | 4:20,138,431-20,140,481 | - | C2H4g09025 | CX4g033001 | LOC_Os04g38880 | Os04g0462600 | - | Detail |
| C1H4g30627 | 4:20,146,849-20,147,703 | - | C2H4g27908 | CX4g034025 | LOC_Os04g38900 | Os04g0462900 | - | Detail |
| C1H4g28569 | 4:20,149,829-20,152,398 | - | C2H4g10984 | CX4g032418 | LOC_Os04g38910 | Os04g0463000 | - | Detail |
| C1H4g14030 | 4:20,158,006-20,158,918 | - | - | - | - | - | - | Detail |
| C1H4g28377 | 4:20,163,434-20,164,307 | - | C2H4g23255 | CX4g034571 | LOC_Os09g23300 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g31445 | 4:20,165,453-20,165,896 | - | C2H4g07912 | CX4g034571 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g09561 | 4:20,169,229-20,172,624 | - | C2H4g28763 | CX4g036538 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| C1H4g11967 | 4:20,174,541-20,177,039 | + | C2H4g28177 | CX4g033159 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| C1H4g05080 | 4:20,179,690-20,181,500 | - | C2H4g13162 | CX4g033067 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| C1H4g02516 | 4:20,181,910-20,188,388 | - | C2H4g07932 | CX4g036672 | LOC_Os04g38980 | Os04g0463800 | - | Detail |
| C1H4g21091 | 4:20,199,235-20,199,681 | - | - | - | - | - | - | Detail |
| C1H4g01794 | 4:20,200,816-20,205,566 | - | C2H4g13985 | CX4g032487 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| C1H4g07451 | 4:20,208,347-20,212,309 | - | C2H4g00984 | CX4g035491 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| C1H4g23214 | 4:20,215,020-20,219,987 | + | C2H4g04170 | CX4g031502 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| C1H4g17346 | 4:20,223,164-20,223,448 | - | C2H4g17707 | - | - | - | - | Detail |
| C1H4g20578 | 4:20,230,246-20,230,536 | - | C2H4g26653 | CX4g036034 | - | - | - | Detail |
| C1H4g22118 | 4:20,242,943-20,249,032 | - | C2H4g00542 | CX4g035608 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| C1H4g16307 | 4:20,253,424-20,254,077 | - | C2H4g07256 | - | - | Os07g0567801 | - | Detail |
| C1H4g10402 | 4:20,258,867-20,259,130 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043134 | 6:1,374,090-1,380,361 | - | C1H6g11836 | C2H6g14254 | LOC_Os06g04510 | Os06g0136600 | - | Detail |
| CX6g041242 | 6:1,381,925-1,392,675 | + | C1H6g12650 | C2H6g06858 | LOC_Os06g04520 | Os06g0136700 | - | Detail |
| CX6g041371 | 6:1,393,615-1,396,534 | + | C1H6g27183 | C2H6g29816 | LOC_Os06g04530 | Os06g0136800 | - | Detail |
| CX6g044427 | 6:1,405,898-1,406,884 | - | - | C2H6g07263 | LOC_Os06g04540 | Os06g0136900 | DP1 | Detail |
| CX6g041492 | 6:1,416,520-1,424,871 | - | C1H6g03718 | C2H6g26508 | LOC_Os06g04560 | Os06g0137100 | - | Detail |
| CX6g043677 | 6:1,425,850-1,426,038 | - | - | - | - | - | - | Detail |
| CX6g043823 | 6:1,430,097-1,433,398 | + | C1H6g00708 | C2H6g14543 | LOC_Os06g04580 | Os06g0137300 | OsYAF9 | Detail |
| CX6g045942 | 6:1,439,605-1,439,964 | + | C1H6g23167 | C2H6g11377 | LOC_Os06g04590 | Os06g0137400 | - | Detail |
| CX6g043470 | 6:1,443,161-1,448,322 | - | C1H6g03688 | C2H6g05549 | LOC_Os06g04600 | Os06g0137500 | - | Detail |
| CX6g042032 | 6:1,449,228-1,450,548 | + | C1H6g19756 | C2H6g21165 | LOC_Os06g04610 | Os06g0137600 | - | Detail |
| CX6g045659 | 6:1,457,358-1,458,488 | + | C1H6g26864 | C2H6g25322 | LOC_Os06g04620 | Os06g0137700 | - | Detail |
| CX6g042092 | 6:1,461,211-1,465,534 | + | C1H6g15651 | C2H6g11346 | LOC_Os06g04640 | Os06g0138000 | - | Detail |
| CX6g043067 | 6:1,466,261-1,467,972 | - | C1H6g27478 | C2H6g15488 | LOC_Os06g04650 | Os06g0138100 | - | Detail |
| CX6g041227 | 6:1,468,366-1,472,274 | + | C1H6g25263 | C2H6g16932 | LOC_Os06g04660 | Os06g0138200 | - | Detail |
| CX6g044072 | 6:1,474,601-1,475,614 | + | C1H6g22039 | C2H6g00635 | LOC_Os06g04670 | Os06g0138400 | - | Detail |
| CX6g043184 | 6:1,477,984-1,479,138 | - | - | C2H6g07751 | LOC_Os06g04680 | Os06g0138600 | - | Detail |
| CX6g044076 | 6:1,480,428-1,484,040 | + | C1H6g02705 | C2H6g23253 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| CX6g045363 | 6:1,486,400-1,486,645 | - | - | - | - | - | - | Detail |
| CX6g042246 | 6:1,487,641-1,490,795 | - | C1H6g03863 | C2H6g10016 | LOC_Os06g04710 | Os06g0139000 | DDF1 | Detail |
| CX6g044405 | 6:1,503,443-1,505,466 | + | C1H6g11816 | C2H6g16226 | LOC_Os06g04790 | Os06g0139800 | - | Detail |