| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g15122 | 3:26,322,445-26,327,910 | - | C1H3g20990 | CX3g026077 | LOC_Os03g50350 | Os03g0711500 | - | Detail |
| C2H3g12801 | 3:26,337,036-26,339,118 | + | C1H3g08172 | CX3g029354 | LOC_Os03g50380 | Os03g0711700 | - | Detail |
| C2H3g24276 | 3:26,343,473-26,355,269 | - | C1H3g12158 | CX3g029539 | LOC_Os03g50390 | Os03g0711800 | - | Detail |
| C2H3g25664 | 3:26,359,250-26,362,417 | + | C1H3g31143 | CX3g027851 | LOC_Os03g50410 | Os03g0712000 | - | Detail |
| C2H3g12487 | 3:26,362,489-26,363,984 | + | C1H3g31821 | CX3g031085 | LOC_Os03g50420 | Os03g0712100 | - | Detail |
| C2H3g02840 | 3:26,365,009-26,367,663 | + | C1H3g09256 | CX3g026342 | LOC_Os03g50430 | Os03g0712200 | - | Detail |
| C2H3g18082 | 3:26,371,214-26,375,990 | + | C1H3g16791 | - | LOC_Os03g50440 | Os03g0712300 | - | Detail |
| C2H3g09846 | 3:26,384,415-26,387,596 | - | C1H3g24688 | CX3g027421 | LOC_Os03g50450 | Os03g0712400 | OsRLK902-1 | Detail |
| C2H3g20542 | 3:26,395,477-26,401,989 | + | C1H3g19333 | CX3g026869 | LOC_Os03g50480 | Os03g0712700 | - | Detail |
| C2H3g20113 | 3:26,405,969-26,406,939 | + | C1H3g19333 | CX3g030337 | LOC_Os03g56730 | Os03g0779800 | - | Detail |
| C2H3g05305 | 3:26,408,271-26,411,972 | - | C1H3g10958 | CX3g026356 | LOC_Os03g50490 | Os03g0712800 | OsGS1;3 | Detail |
| C2H3g19774 | 3:26,415,271-26,417,580 | + | C1H3g08986 | CX3g025113 | LOC_Os03g50500 | Os03g0712900 | - | Detail |
| C2H3g15113 | 3:26,423,571-26,428,603 | + | C1H3g19170 | CX3g031207 | LOC_Os03g50510 | Os03g0713000 | - | Detail |
| C2H3g02418 | 3:26,431,112-26,436,912 | + | C1H3g19053 | CX3g031036 | LOC_Os03g50520 | Os03g0713100 | OsDRP1C | Detail |
| C2H3g24098 | 3:26,437,066-26,437,991 | - | C1H3g13877 | CX3g026018 | - | Os03g0713200 | - | Detail |
| C2H3g23445 | 3:26,439,005-26,443,313 | - | C1H3g21559 | CX3g028182 | LOC_Os03g50540 | Os03g0713400 | - | Detail |
| C2H3g16804 | 3:26,447,646-26,448,701 | + | C1H3g30817 | CX3g028518 | LOC_Os03g50550 | Os03g0713500 | - | Detail |
| C2H3g13293 | 3:26,453,332-26,454,363 | + | C1H3g28404 | CX3g025056 | LOC_Os03g50550 | Os03g0713500 | - | Detail |
| C2H3g21613 | 3:26,456,994-26,457,425 | + | - | - | - | - | - | Detail |
| C2H3g10695 | 3:26,460,834-26,464,865 | - | C1H3g31580 | CX3g031057 | LOC_Os03g50560 | Os03g0713600 | PIBP1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045866 | 6:1,216,927-1,217,559 | - | C1H6g17422 | C2H6g25055 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| CX6g043331 | 6:1,222,282-1,225,597 | + | C1H6g23540 | C2H6g03148 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| CX6g043924 | 6:1,228,847-1,229,143 | + | - | C2H6g22217 | LOC_Os06g04210 | Os06g0133200 | - | Detail |
| CX6g044984 | 6:1,232,606-1,232,890 | + | - | C2H6g28022 | LOC_Os06g04220 | Os06g0133300 | - | Detail |
| CX6g042298 | 6:1,237,236-1,237,517 | - | C1H6g09083 | C2H6g03555 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| CX6g042617 | 6:1,243,315-1,244,382 | + | - | C2H6g25685 | LOC_Os06g04250 | Os06g0133600 | - | Detail |
| CX6g044476 | 6:1,263,206-1,266,262 | - | C1H6g21882 | C2H6g30353 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| CX6g044113 | 6:1,269,497-1,273,342 | + | C1H6g02027 | C2H6g15004 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| CX6g041350 | 6:1,274,168-1,275,885 | - | C1H6g14754 | C2H6g06475 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| CX6g045804 | 6:1,276,833-1,279,324 | - | C1H6g07407 | C2H6g13486 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| CX6g042141 | 6:1,308,419-1,313,021 | - | C1H6g08483 | C2H6g27381 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| CX6g044169 | 6:1,320,823-1,324,058 | + | C1H6g22115 | C2H6g22079 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| CX6g042673 | 6:1,329,557-1,332,496 | - | C1H6g09734 | C2H6g05948 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| CX6g045585 | 6:1,333,860-1,337,092 | - | C1H6g26114 | C2H6g22649 | LOC_Os06g04390 | Os06g0134900 | - | Detail |
| CX6g045193 | 6:1,338,905-1,339,060 | + | - | - | - | - | - | Detail |
| CX6g044281 | 6:1,347,615-1,354,220 | - | C1H6g17670 | C2H6g20533 | LOC_Os06g04450 | Os06g0135900 | - | Detail |
| CX6g041186 | 6:1,355,218-1,358,203 | - | C1H6g18799 | C2H6g29697 | LOC_Os06g04460 | Os06g0136000 | - | Detail |
| CX6g045091 | 6:1,359,864-1,363,486 | - | C1H6g16251 | C2H6g03212 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| CX6g042860 | 6:1,366,002-1,366,579 | + | C1H6g20742 | C2H6g27965 | LOC_Os06g04480 | Os06g0136300 | - | Detail |
| CX6g043687 | 6:1,370,306-1,372,997 | + | C1H6g01692 | C2H6g24780 | LOC_Os06g04500 | Os06g0136500 | - | Detail |