| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g28597 | 3:2,972,225-2,972,470 | - | C1H3g08120 | - | LOC_Os03g06790 | Os03g0163600 | - | Detail |
| C2H3g24201 | 3:2,984,055-2,984,324 | - | C1H3g08120 | CX6g044926 | LOC_Os03g06800 | Os03g0163900 | - | Detail |
| C2H3g08001 | 3:2,998,583-3,001,029 | + | C1H3g31538 | CX3g031186 | LOC_Os03g06880 | Os03g0164700 | - | Detail |
| C2H3g12377 | 3:3,002,486-3,004,841 | - | C1H3g13873 | CX3g030325 | LOC_Os03g06890 | Os03g0164800 | - | Detail |
| C2H3g23822 | 3:3,006,975-3,007,508 | + | C1H3g21506 | CX3g029502 | - | Os03g0164901 | - | Detail |
| C2H3g07393 | 3:3,011,056-3,021,317 | - | C1H3g29883 | CX3g026349 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| C2H3g24120 | 3:3,021,674-3,025,793 | - | C1H3g17508 | CX3g027841 | LOC_Os03g06910 | Os03g0165100 | - | Detail |
| C2H3g16754 | 3:3,026,112-3,028,022 | + | C1H3g30143 | - | LOC_Os03g06920 | - | - | Detail |
| C2H3g12144 | 3:3,028,381-3,034,497 | + | C1H3g17985 | CX3g027850 | LOC_Os03g06920 | Os03g0165266 | OsCHR730, CHR730 | Detail |
| C2H3g20116 | 3:3,035,390-3,037,459 | - | C1H3g21677 | CX3g028821 | LOC_Os03g06930 | Os03g0165300 | - | Detail |
| C2H3g10784 | 3:3,037,579-3,039,438 | - | C1H3g31542 | - | - | - | - | Detail |
| C2H3g07914 | 3:3,043,635-3,043,931 | + | C1H3g17647 | CX3g025536 | - | Os03g0165375 | - | Detail |
| C2H3g24716 | 3:3,046,983-3,053,495 | - | C1H3g30263 | CX3g028153 | LOC_Os03g06940 | Os03g0165400 | - | Detail |
| C2H3g14394 | 3:3,061,798-3,072,911 | - | C1H3g12191 | CX3g027771 | LOC_Os03g06950 | Os03g0165600 | - | Detail |
| C2H3g15746 | 3:3,074,102-3,076,440 | + | C1H3g13896 | CX3g030842 | LOC_Os03g06960 | Os03g0165800 | - | Detail |
| C2H3g22818 | 3:3,078,105-3,080,783 | - | C1H3g22228 | CX3g028104 | LOC_Os03g06970 | Os03g0165900 | - | Detail |
| C2H3g18146 | 3:3,081,081-3,081,401 | - | C1H3g16704 | - | - | - | - | Detail |
| C2H3g11279 | 3:3,084,398-3,087,708 | - | C1H3g06157 | CX3g026438 | LOC_Os03g06980 | Os03g0166000 | - | Detail |
| C2H3g30212 | 3:3,089,933-3,092,072 | + | C1H3g11602 | CX3g025523 | LOC_Os03g07000 | Os03g0166100 | - | Detail |
| C2H3g23098 | 3:3,092,794-3,094,670 | + | C1H3g09271 | CX3g027208 | LOC_Os03g07000 | Os03g0166200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045866 | 6:1,216,927-1,217,559 | - | C1H6g17422 | C2H6g25055 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| CX6g043331 | 6:1,222,282-1,225,597 | + | C1H6g23540 | C2H6g03148 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| CX6g043924 | 6:1,228,847-1,229,143 | + | - | C2H6g22217 | LOC_Os06g04210 | Os06g0133200 | - | Detail |
| CX6g044984 | 6:1,232,606-1,232,890 | + | - | C2H6g28022 | LOC_Os06g04220 | Os06g0133300 | - | Detail |
| CX6g042298 | 6:1,237,236-1,237,517 | - | C1H6g09083 | C2H6g03555 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| CX6g042617 | 6:1,243,315-1,244,382 | + | - | C2H6g25685 | LOC_Os06g04250 | Os06g0133600 | - | Detail |
| CX6g044476 | 6:1,263,206-1,266,262 | - | C1H6g21882 | C2H6g30353 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| CX6g044113 | 6:1,269,497-1,273,342 | + | C1H6g02027 | C2H6g15004 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| CX6g041350 | 6:1,274,168-1,275,885 | - | C1H6g14754 | C2H6g06475 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| CX6g045804 | 6:1,276,833-1,279,324 | - | C1H6g07407 | C2H6g13486 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| CX6g042141 | 6:1,308,419-1,313,021 | - | C1H6g08483 | C2H6g27381 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| CX6g044169 | 6:1,320,823-1,324,058 | + | C1H6g22115 | C2H6g22079 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| CX6g042673 | 6:1,329,557-1,332,496 | - | C1H6g09734 | C2H6g05948 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| CX6g045585 | 6:1,333,860-1,337,092 | - | C1H6g26114 | C2H6g22649 | LOC_Os06g04390 | Os06g0134900 | - | Detail |
| CX6g045193 | 6:1,338,905-1,339,060 | + | - | - | - | - | - | Detail |
| CX6g044281 | 6:1,347,615-1,354,220 | - | C1H6g17670 | C2H6g20533 | LOC_Os06g04450 | Os06g0135900 | - | Detail |
| CX6g041186 | 6:1,355,218-1,358,203 | - | C1H6g18799 | C2H6g29697 | LOC_Os06g04460 | Os06g0136000 | - | Detail |
| CX6g045091 | 6:1,359,864-1,363,486 | - | C1H6g16251 | C2H6g03212 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| CX6g042860 | 6:1,366,002-1,366,579 | + | C1H6g20742 | C2H6g27965 | LOC_Os06g04480 | Os06g0136300 | - | Detail |
| CX6g043687 | 6:1,370,306-1,372,997 | + | C1H6g01692 | C2H6g24780 | LOC_Os06g04500 | Os06g0136500 | - | Detail |