| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g13632 | 4:17,993,820-17,994,968 | + | C2H4g10939 | - | - | - | - | Detail |
| C1H4g30119 | 4:18,006,035-18,006,529 | + | C2H4g24330 | - | - | - | - | Detail |
| C1H4g03311 | 4:18,018,828-18,021,251 | + | C2H4g08150 | CX4g033680 | LOC_Os04g34250 | Os04g0419700 | SDRLK-51 | Detail |
| C1H4g04575 | 4:18,029,888-18,032,338 | + | C2H4g26271 | CX4g033680 | LOC_Os04g34290 | Os04g0420033 | SDRLK-26 | Detail |
| C1H4g20867 | 4:18,035,596-18,036,604 | - | C2H1g15809 | CX4g036115 | LOC_Os12g34470 | - | - | Detail |
| C1H4g01062 | 4:18,041,704-18,044,157 | + | C2H4g13042 | CX4g033680 | LOC_Os04g34300 | Os04g0420300 | - | Detail |
| C1H4g19142 | 4:18,047,722-18,048,387 | + | C2H4g16865 | - | LOC_Os04g34290 | Os04g0420033 | SDRLK-26 | Detail |
| C1H4g21702 | 4:18,048,409-18,050,301 | + | C2H4g16865 | CX4g033680 | LOC_Os04g34320 | Os04g0420033 | SDRLK-26 | Detail |
| C1H4g15228 | 4:18,052,679-18,055,075 | + | C2H4g05707 | CX4g033680 | LOC_Os04g34330 | Os04g0420600 | SDRLK-27 | Detail |
| C1H4g31317 | 4:18,053,195-18,056,469 | - | C2H4g16575 | - | - | - | - | Detail |
| C1H4g27516 | 4:18,064,025-18,066,392 | + | C2H4g18021 | CX4g033680 | LOC_Os04g34370 | Os04g0420900 | SDRLK-28 | Detail |
| C1H4g17134 | 4:18,069,623-18,072,043 | + | C2H4g18021 | CX4g033680 | LOC_Os04g34370 | Os04g0420900 | SDRLK-28 | Detail |
| C1H4g06037 | 4:18,077,147-18,079,234 | + | C2H4g06952 | - | LOC_Os04g34390 | Os04g0420900 | SDRLK-28 | Detail |
| C1H4g25956 | 4:18,082,631-18,085,039 | + | C2H4g03046 | CX4g033680 | LOC_Os04g34420 | Os04g0420900 | SDRLK-28 | Detail |
| C1H4g21817 | 4:18,087,201-18,090,860 | - | C2H4g23175 | CX4g032456 | LOC_Os04g30870 | Os04g0421700 | - | Detail |
| C1H4g07421 | 4:18,091,951-18,097,799 | - | C2H4g26985 | CX4g033351 | LOC_Os04g34440 | Os04g0421800 | - | Detail |
| C1H4g28729 | 4:18,102,653-18,111,931 | + | C2H4g06424 | CX4g033137 | LOC_Os04g34450 | Os04g0421900 | - | Detail |
| C1H4g07371 | 4:18,113,644-18,115,582 | + | C2H4g13085 | CX4g035201 | LOC_Os04g34460 | Os04g0422000 | - | Detail |
| C1H4g20919 | 4:18,119,336-18,119,598 | - | C2H4g17131 | CX4g033312 | LOC_Os04g34480 | Os04g0422200 | - | Detail |
| C1H4g19536 | 4:18,119,718-18,119,936 | - | C2H4g13723 | CX4g033312 | LOC_Os04g34480 | Os04g0422200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042961 | 6:1,050,342-1,057,565 | + | C1H6g16816 | C2H6g21946 | LOC_Os06g03940 | Os06g0130000 | - | Detail |
| CX6g042663 | 6:1,059,591-1,063,418 | - | - | C2H6g05392 | LOC_Os06g50290 | Os06g0117800 | - | Detail |
| CX6g045059 | 6:1,071,194-1,077,339 | + | C1H6g10621 | C2H6g29452 | LOC_Os06g03970 | Os06g0130100 | - | Detail |
| CX6g044073 | 6:1,079,660-1,085,708 | - | C1H6g10956 | C2H6g19930 | LOC_Os06g03980 | Os06g0130200 | - | Detail |
| CX6g042850 | 6:1,096,184-1,099,345 | + | C1H6g25934 | C2H6g06199 | LOC_Os06g03990 | Os06g0130400 | SSG6, OsACS6 | Detail |
| CX6g044708 | 6:1,102,310-1,104,563 | - | C1H6g20077 | C2H6g10031 | LOC_Os06g04010 | Os06g0130600 | OsGBP1 | Detail |
| CX6g044104 | 6:1,108,320-1,109,199 | - | C1H6g17787 | C2H6g17502 | LOC_Os06g04020 | Os06g0130800 | - | Detail |
| CX6g042400 | 6:1,111,081-1,111,695 | - | C1H6g00179 | C2H6g03952 | LOC_Os06g04030 | Os06g0130900 | - | Detail |
| CX6g044062 | 6:1,114,062-1,119,336 | + | C1H6g27483 | C2H6g02995 | LOC_Os06g04040 | Os06g0131100 | - | Detail |
| CX6g045583 | 6:1,136,949-1,139,057 | - | - | C2H6g25218 | LOC_Os06g04070 | Os06g0131300 | ADC1, OsADC1, ARGDC, ADC, OsAdc1 | Detail |
| CX6g044576 | 6:1,150,406-1,151,410 | - | C1H2g17033 | - | - | Os06g0265100 | - | Detail |
| CX6g044602 | 6:1,156,863-1,158,918 | + | C1H6g21967 | C2H6g23727 | LOC_Os06g04080 | Os06g0131500 | - | Detail |
| CX6g041785 | 6:1,159,426-1,159,806 | - | - | - | - | Os06g0324000 | - | Detail |
| CX6g041745 | 6:1,165,740-1,168,299 | - | C1H6g10070 | C2H6g24358 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| CX6g042310 | 6:1,186,400-1,187,764 | - | - | C2H6g10300 | LOC_Os06g04130 | Os06g0132100 | - | Detail |
| CX6g043564 | 6:1,189,687-1,190,256 | - | C1H6g21299 | C2H6g28984 | LOC_Os06g04140 | Os06g0132300 | - | Detail |
| CX6g044687 | 6:1,191,065-1,192,045 | - | C1H6g21299 | C2H6g09752 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| CX6g044041 | 6:1,193,750-1,199,623 | - | C1H6g23000 | C2H6g08599 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| CX6g041905 | 6:1,213,633-1,214,415 | - | C1H6g17422 | C2H6g25055 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| CX6g042469 | 6:1,215,140-1,216,153 | + | - | - | LOC_Os01g05730 | - | - | Detail |