| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g12219 | 3:22,325,631-22,327,930 | - | C2H3g20166 | CX3g028574 | LOC_Os03g42320 | Os03g0620800 | - | Detail |
| C1H3g22508 | 3:22,339,513-22,345,748 | + | C2H3g02303 | CX3g028555 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| C1H3g04432 | 3:22,352,614-22,357,617 | + | C2H3g25619 | CX3g025711 | LOC_Os03g42370 | Os03g0621600 | - | Detail |
| C1H3g02847 | 3:22,359,845-22,361,199 | + | C2H3g10252 | CX3g025711 | LOC_Os03g42370 | Os03g0621650 | - | Detail |
| C1H3g27507 | 3:22,364,160-22,368,383 | + | C2H3g03230 | CX3g025711 | LOC_Os03g42410 | Os03g0621900 | - | Detail |
| C1H3g24168 | 3:22,375,301-22,381,885 | + | C2H3g25799 | CX3g026756 | LOC_Os03g42430 | Os03g0622200 | - | Detail |
| C1H3g21229 | 3:22,384,189-22,384,574 | - | C2H3g07291 | CX3g029697 | LOC_Os03g42440 | Os03g0622600 | - | Detail |
| C1H3g08904 | 3:22,400,139-22,400,521 | - | C2H3g28170 | CX3g029697 | LOC_Os03g42480 | Os03g0622600 | - | Detail |
| C1H3g29338 | 3:22,407,131-22,407,838 | + | C2H3g03196 | CX3g025485 | LOC_Os03g42520 | Os03g0623100 | - | Detail |
| C1H3g27916 | 3:22,458,560-22,468,533 | + | C2H3g21699 | CX3g030736 | LOC_Os03g42569 | Os03g0624000 | - | Detail |
| C1H3g08494 | 3:22,493,959-22,495,899 | + | C2H3g25313 | CX3g028370 | LOC_Os03g42630 | Os03g0624600 | - | Detail |
| C1H3g16137 | 3:22,499,711-22,505,056 | + | C2H3g09083 | CX3g027964 | LOC_Os03g42650 | Os03g0624800 | - | Detail |
| C1H3g14712 | 3:22,555,640-22,566,779 | - | C2H3g06917 | CX3g025039 | LOC_Os03g42750 | Os03g0625700 | OsSEC3A | Detail |
| C1H3g19655 | 3:22,571,599-22,573,365 | - | - | - | - | - | - | Detail |
| C1H3g07578 | 3:22,574,713-22,578,021 | + | C2H3g29064 | CX3g029759 | LOC_Os03g42760 | Os03g0625800 | - | Detail |
| C1H3g16517 | 3:22,579,774-22,586,327 | - | C2H3g01975 | CX3g027078 | LOC_Os03g42770 | Os03g0625900 | - | Detail |
| C1H3g21514 | 3:22,592,933-22,595,710 | + | C2H3g08723 | CX3g029343 | LOC_Os03g42780 | Os03g0625933 | - | Detail |
| C1H3g29387 | 3:22,596,138-22,596,857 | + | C2H3g20687 | CX3g029343 | LOC_Os03g42780 | Os03g0626000 | - | Detail |
| C1H3g27155 | 3:22,605,196-22,608,351 | + | C2H3g23218 | CX3g030994 | LOC_Os03g42790 | Os03g0626100 | qGL3.5 | Detail |
| C1H3g08632 | 3:22,618,709-22,620,596 | + | C2H3g15721 | CX3g030519 | LOC_Os03g42810 | Os03g0626500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042961 | 6:1,050,342-1,057,565 | + | C1H6g16816 | C2H6g21946 | LOC_Os06g03940 | Os06g0130000 | - | Detail |
| CX6g042663 | 6:1,059,591-1,063,418 | - | - | C2H6g05392 | LOC_Os06g50290 | Os06g0117800 | - | Detail |
| CX6g045059 | 6:1,071,194-1,077,339 | + | C1H6g10621 | C2H6g29452 | LOC_Os06g03970 | Os06g0130100 | - | Detail |
| CX6g044073 | 6:1,079,660-1,085,708 | - | C1H6g10956 | C2H6g19930 | LOC_Os06g03980 | Os06g0130200 | - | Detail |
| CX6g042850 | 6:1,096,184-1,099,345 | + | C1H6g25934 | C2H6g06199 | LOC_Os06g03990 | Os06g0130400 | SSG6, OsACS6 | Detail |
| CX6g044708 | 6:1,102,310-1,104,563 | - | C1H6g20077 | C2H6g10031 | LOC_Os06g04010 | Os06g0130600 | OsGBP1 | Detail |
| CX6g044104 | 6:1,108,320-1,109,199 | - | C1H6g17787 | C2H6g17502 | LOC_Os06g04020 | Os06g0130800 | - | Detail |
| CX6g042400 | 6:1,111,081-1,111,695 | - | C1H6g00179 | C2H6g03952 | LOC_Os06g04030 | Os06g0130900 | - | Detail |
| CX6g044062 | 6:1,114,062-1,119,336 | + | C1H6g27483 | C2H6g02995 | LOC_Os06g04040 | Os06g0131100 | - | Detail |
| CX6g045583 | 6:1,136,949-1,139,057 | - | - | C2H6g25218 | LOC_Os06g04070 | Os06g0131300 | ADC1, OsADC1, ARGDC, ADC, OsAdc1 | Detail |
| CX6g044576 | 6:1,150,406-1,151,410 | - | C1H2g17033 | - | - | Os06g0265100 | - | Detail |
| CX6g044602 | 6:1,156,863-1,158,918 | + | C1H6g21967 | C2H6g23727 | LOC_Os06g04080 | Os06g0131500 | - | Detail |
| CX6g041785 | 6:1,159,426-1,159,806 | - | - | - | - | Os06g0324000 | - | Detail |
| CX6g041745 | 6:1,165,740-1,168,299 | - | C1H6g10070 | C2H6g24358 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| CX6g042310 | 6:1,186,400-1,187,764 | - | - | C2H6g10300 | LOC_Os06g04130 | Os06g0132100 | - | Detail |
| CX6g043564 | 6:1,189,687-1,190,256 | - | C1H6g21299 | C2H6g28984 | LOC_Os06g04140 | Os06g0132300 | - | Detail |
| CX6g044687 | 6:1,191,065-1,192,045 | - | C1H6g21299 | C2H6g09752 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| CX6g044041 | 6:1,193,750-1,199,623 | - | C1H6g23000 | C2H6g08599 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| CX6g041905 | 6:1,213,633-1,214,415 | - | C1H6g17422 | C2H6g25055 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| CX6g042469 | 6:1,215,140-1,216,153 | + | - | - | LOC_Os01g05730 | - | - | Detail |