| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20387 | 1:4,615,648-4,621,016 | - | C2H1g18174 | CX1g005780 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| C1H1g24747 | 1:4,625,322-4,627,722 | + | C2H1g17197 | CX1g005121 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| C1H1g23699 | 1:4,630,848-4,633,095 | - | C2H1g12602 | CX1g002532 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| C1H1g02388 | 1:4,638,822-4,643,241 | - | C2H1g29964 | CX1g000181 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| C1H1g16458 | 1:4,652,985-4,684,621 | - | C2H1g14250 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C1H1g16973 | 1:4,689,399-4,695,941 | - | C2H1g26620 | CX1g001693 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| C1H1g29548 | 1:4,706,450-4,708,184 | - | C2H1g23718 | CX1g002926 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| C1H1g25179 | 1:4,741,911-4,746,181 | - | C2H1g26709 | CX1g006691 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| C1H1g11604 | 1:4,749,569-4,750,411 | + | - | CX1g002814 | - | Os01g0644500 | - | Detail |
| C1H1g07163 | 1:4,752,722-4,753,306 | - | C2H1g26843 | CX1g002407 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| C1H1g01459 | 1:4,757,329-4,764,113 | + | C2H1g21983 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C1H1g26995 | 1:4,765,555-4,767,963 | - | C2H1g11537 | CX1g006987 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| C1H1g02233 | 1:4,770,039-4,771,505 | + | C2H1g00798 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C1H1g09040 | 1:4,774,525-4,774,752 | + | C2H1g29755 | - | - | - | - | Detail |
| C1H1g07309 | 1:4,781,266-4,786,250 | - | C2H1g25742 | CX1g001960 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| C1H1g18253 | 1:4,790,093-4,796,908 | - | C2H1g13754 | CX1g004279 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| C1H1g19440 | 1:4,797,390-4,800,075 | + | C2H1g05709 | CX1g005266 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| C1H1g04932 | 1:4,817,503-4,818,352 | + | C2H1g10402 | - | LOC_Os01g10400 | Os01g0200700 | OsMT-3a | Detail |
| C1H1g30875 | 1:4,826,637-4,832,684 | + | C2H1g28750 | CX1g000013 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| C1H1g18217 | 1:4,841,173-4,842,832 | + | C2H1g28750 | CX1g006358 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042961 | 6:1,050,342-1,057,565 | + | C1H6g16816 | C2H6g21946 | LOC_Os06g03940 | Os06g0130000 | - | Detail |
| CX6g042663 | 6:1,059,591-1,063,418 | - | - | C2H6g05392 | LOC_Os06g50290 | Os06g0117800 | - | Detail |
| CX6g045059 | 6:1,071,194-1,077,339 | + | C1H6g10621 | C2H6g29452 | LOC_Os06g03970 | Os06g0130100 | - | Detail |
| CX6g044073 | 6:1,079,660-1,085,708 | - | C1H6g10956 | C2H6g19930 | LOC_Os06g03980 | Os06g0130200 | - | Detail |
| CX6g042850 | 6:1,096,184-1,099,345 | + | C1H6g25934 | C2H6g06199 | LOC_Os06g03990 | Os06g0130400 | SSG6, OsACS6 | Detail |
| CX6g044708 | 6:1,102,310-1,104,563 | - | C1H6g20077 | C2H6g10031 | LOC_Os06g04010 | Os06g0130600 | OsGBP1 | Detail |
| CX6g044104 | 6:1,108,320-1,109,199 | - | C1H6g17787 | C2H6g17502 | LOC_Os06g04020 | Os06g0130800 | - | Detail |
| CX6g042400 | 6:1,111,081-1,111,695 | - | C1H6g00179 | C2H6g03952 | LOC_Os06g04030 | Os06g0130900 | - | Detail |
| CX6g044062 | 6:1,114,062-1,119,336 | + | C1H6g27483 | C2H6g02995 | LOC_Os06g04040 | Os06g0131100 | - | Detail |
| CX6g045583 | 6:1,136,949-1,139,057 | - | - | C2H6g25218 | LOC_Os06g04070 | Os06g0131300 | ADC1, OsADC1, ARGDC, ADC, OsAdc1 | Detail |
| CX6g044576 | 6:1,150,406-1,151,410 | - | C1H2g17033 | - | - | Os06g0265100 | - | Detail |
| CX6g044602 | 6:1,156,863-1,158,918 | + | C1H6g21967 | C2H6g23727 | LOC_Os06g04080 | Os06g0131500 | - | Detail |
| CX6g041785 | 6:1,159,426-1,159,806 | - | - | - | - | Os06g0324000 | - | Detail |
| CX6g041745 | 6:1,165,740-1,168,299 | - | C1H6g10070 | C2H6g24358 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| CX6g042310 | 6:1,186,400-1,187,764 | - | - | C2H6g10300 | LOC_Os06g04130 | Os06g0132100 | - | Detail |
| CX6g043564 | 6:1,189,687-1,190,256 | - | C1H6g21299 | C2H6g28984 | LOC_Os06g04140 | Os06g0132300 | - | Detail |
| CX6g044687 | 6:1,191,065-1,192,045 | - | C1H6g21299 | C2H6g09752 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| CX6g044041 | 6:1,193,750-1,199,623 | - | C1H6g23000 | C2H6g08599 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| CX6g041905 | 6:1,213,633-1,214,415 | - | C1H6g17422 | C2H6g25055 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| CX6g042469 | 6:1,215,140-1,216,153 | + | - | - | LOC_Os01g05730 | - | - | Detail |