| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20143 | 1:31,987,794-31,990,960 | + | C2H1g09224 | CX1g000114 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| C1H1g19514 | 1:31,992,421-31,993,980 | - | C2H1g21773 | CX1g000325 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| C1H1g29893 | 1:32,007,669-32,008,127 | - | C2H1g18215 | CX1g001065 | LOC_Os01g62310 | - | - | Detail |
| C1H1g00377 | 1:32,008,788-32,009,901 | - | C2H1g27558 | CX1g001065 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| C1H1g17139 | 1:32,017,474-32,019,413 | - | C2H1g18392 | CX1g004150 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| C1H1g12130 | 1:32,025,615-32,026,759 | + | C2H1g21625 | CX1g003133 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| C1H1g21585 | 1:32,032,310-32,033,584 | - | C2H1g05303 | CX1g001868 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| C1H1g08278 | 1:32,036,050-32,040,980 | - | C2H1g18206 | CX1g005410 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| C1H1g27442 | 1:32,048,806-32,054,280 | + | C2H1g01645 | CX1g006283 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| C1H1g29013 | 1:32,054,965-32,057,733 | + | C2H1g14112 | CX1g001946 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| C1H1g20425 | 1:32,062,521-32,063,627 | + | C2H1g22797 | CX1g000812 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| C1H1g09787 | 1:32,064,224-32,071,896 | - | C2H1g16312 | CX1g005408 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| C1H1g04968 | 1:32,084,495-32,087,400 | + | C2H1g22514 | CX1g003735 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| C1H1g14751 | 1:32,092,309-32,095,261 | - | C2H1g04788 | CX1g004737 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| C1H1g07793 | 1:32,103,798-32,106,521 | - | C2H1g08845 | CX1g005658 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| C1H1g12370 | 1:32,108,857-32,114,415 | - | C2H1g06756 | CX1g000259 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| C1H1g05990 | 1:32,115,188-32,115,835 | - | C2H1g03150 | CX1g006004 | LOC_Os01g62510 | Os01g0972800 | - | Detail |
| C1H1g15936 | 1:32,119,622-32,120,266 | - | C2H1g11458 | CX1g006004 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| C1H1g02981 | 1:32,129,185-32,132,691 | - | C2H6g28684 | CX1g006531 | LOC_Os03g62810 | - | - | Detail |
| C1H1g19031 | 1:32,132,893-32,134,636 | - | C2H1g15515 | CX1g006003 | LOC_Os01g62530 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003680 | 1:23,994,973-23,995,566 | - | C1H1g28789 | C2H1g28481 | LOC_Os01g47180 | Os01g0660800 | - | Detail |
| CX1g003163 | 1:23,997,504-23,999,489 | + | C1H1g16470 | C2H1g18107 | LOC_Os01g47190 | Os01g0660900 | - | Detail |
| CX1g000228 | 1:24,000,863-24,002,901 | + | C1H1g29400 | C2H1g15986 | LOC_Os01g47200 | Os01g0661000 | - | Detail |
| CX1g006078 | 1:24,003,611-24,006,371 | + | C1H1g20377 | C2H1g14655 | LOC_Os01g47256 | Os01g0661400 | - | Detail |
| CX1g002253 | 1:24,008,810-24,011,172 | + | C1H1g00872 | C2H1g25335 | LOC_Os01g47262 | Os01g0661500 | - | Detail |
| CX1g004124 | 1:24,013,665-24,014,264 | - | C1H5g09281 | C2H5g10434 | LOC_Os01g47270 | Os01g0639600 | - | Detail |
| CX1g003178 | 1:24,017,072-24,018,109 | + | - | - | - | - | - | Detail |
| CX1g006841 | 1:24,021,124-24,021,537 | - | - | - | - | Os01g0661700 | - | Detail |
| CX1g006943 | 1:24,035,568-24,036,119 | + | C1H5g25001 | C2H5g09227 | LOC_Os01g47330 | Os01g0662300 | PRPL12, AL1 | Detail |
| CX1g005413 | 1:24,041,485-24,044,041 | - | C1H1g19448 | C2H1g08324 | LOC_Os01g47340 | Os01g0662600 | - | Detail |
| CX1g002289 | 1:24,044,963-24,048,474 | - | C1H1g05134 | C2H1g14729 | LOC_Os01g47350 | Os01g0662700 | - | Detail |
| CX1g004566 | 1:24,049,863-24,050,755 | - | C1H1g10735 | C2H1g15766 | LOC_Os01g47360 | Os01g0662800 | - | Detail |
| CX1g006633 | 1:24,053,770-24,054,162 | - | - | C2H3g10678 | - | - | - | Detail |
| CX1g005538 | 1:24,059,609-24,059,836 | - | C1H1g03031 | C2H1g22021 | LOC_Os01g47370 | Os01g0663051 | - | Detail |
| CX1g003035 | 1:24,084,592-24,088,101 | + | C1H1g19967 | C2H1g06649 | LOC_Os01g47400 | Os01g0663300 | - | Detail |
| CX1g005181 | 1:24,088,787-24,094,540 | - | C1H1g06428 | C2H1g03406 | LOC_Os01g47410 | Os01g0663400 | - | Detail |
| CX1g002782 | 1:24,096,557-24,101,831 | + | C1H1g24333 | C2H1g02394 | LOC_Os01g47420 | Os01g0663500 | - | Detail |
| CX1g003201 | 1:24,104,434-24,110,836 | - | C1H1g22818 | C2H1g05152 | LOC_Os01g47430 | Os01g0663800 | - | Detail |
| CX1g001428 | 1:24,113,661-24,113,975 | - | - | - | - | - | - | Detail |
| CX1g000692 | 1:24,114,851-24,119,476 | + | C1H1g18728 | C2H1g27469 | LOC_Os01g47450 | Os01g0664000 | - | Detail |