| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g22076 | 6:21,124,238-21,130,003 | - | C2H6g24273 | CX6g044547 | LOC_Os06g40600 | Os06g0608300 | - | Detail |
| C1H6g01423 | 6:21,139,332-21,143,392 | + | C2H6g17388 | CX6g044120 | LOC_Os06g40620 | Os06g0608500 | OsSNF7 | Detail |
| C1H6g30921 | 6:21,144,549-21,147,598 | + | C2H6g02272 | CX6g041248 | LOC_Os06g40630 | Os06g0608600 | - | Detail |
| C1H6g15681 | 6:21,148,525-21,150,426 | + | C2H6g07039 | CX6g042521 | LOC_Os06g40640 | Os06g0608700 | OsAld-Y, YGDL-1, YGDL1 | Detail |
| C1H6g06287 | 6:21,150,746-21,155,780 | - | C2H6g15713 | CX6g042318 | LOC_Os06g40650 | Os06g0608800 | - | Detail |
| C1H6g19126 | 6:21,166,945-21,170,117 | + | C2H6g26999 | CX6g045736 | LOC_Os06g40700 | Os06g0624100 | - | Detail |
| C1H6g06163 | 6:21,170,265-21,172,117 | + | C2H6g28606 | CX6g045736 | LOC_Os06g40700 | Os06g0609400 | - | Detail |
| C1H6g19676 | 6:21,173,086-21,176,777 | + | C2H6g16115 | CX6g045105 | LOC_Os06g40704 | Os06g0609450 | - | Detail |
| C1H6g12368 | 6:21,177,866-21,181,759 | + | C2H6g21391 | CX6g043749 | LOC_Os06g40710 | Os06g0609500 | OsPHL7 | Detail |
| C1H6g04751 | 6:21,182,013-21,184,653 | - | C2H6g29481 | CX6g042186 | LOC_Os06g40720 | Os06g0609600 | - | Detail |
| C1H6g30193 | 6:21,185,606-21,190,728 | - | C2H6g01530 | CX6g045467 | LOC_Os06g40730 | Os06g0609700 | - | Detail |
| C1H6g00899 | 6:21,194,608-21,194,874 | - | - | CX6g044431 | - | - | - | Detail |
| C1H6g07576 | 6:21,196,243-21,200,730 | + | C2H6g10244 | CX6g044752 | LOC_Os06g40740 | Os06g0609800 | - | Detail |
| C1H6g25666 | 6:21,215,826-21,216,014 | + | C2H12g22973 | - | - | - | - | Detail |
| C1H6g25384 | 6:21,226,685-21,227,023 | + | C2H6g14064 | CX6g041256 | LOC_Os06g40760 | Os06g0610000 | - | Detail |
| C1H6g18302 | 6:21,229,449-21,230,143 | - | C2H6g20829 | - | - | - | - | Detail |
| C1H6g22505 | 6:21,230,244-21,232,038 | - | C2H6g27774 | CX6g044746 | LOC_Os06g40770 | Os06g0610100 | - | Detail |
| C1H6g08372 | 6:21,245,544-21,246,866 | + | C2H6g11731 | - | LOC_Os06g40780 | Os06g0610350 | MOC1, moc1, GNP6, GNP6/MOC1 | Detail |
| C1H6g20200 | 6:21,262,698-21,268,808 | - | C2H6g16548 | CX6g042823 | LOC_Os06g40790 | Os06g0610500 | - | Detail |
| C1H6g13703 | 6:21,275,845-21,280,611 | + | C2H6g06441 | CX6g043158 | LOC_Os06g40818 | Os06g0610800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003408 | 1:1,872,307-1,873,809 | + | C1H1g20192 | C2H1g13473 | LOC_Os01g04880 | Os01g0141900 | - | Detail |
| CX1g004217 | 1:1,874,758-1,879,112 | - | C1H1g08627 | C2H1g10525 | LOC_Os01g04900 | Os01g0142100 | - | Detail |
| CX1g004602 | 1:1,879,352-1,881,194 | + | C1H1g24636 | C2H1g29642 | LOC_Os01g04910 | Os01g0142200 | - | Detail |
| CX1g005334 | 1:1,883,564-1,886,817 | + | C1H1g21356 | C2H1g02460 | LOC_Os01g04920 | Os01g0142300 | SQD2.2, OsSQD2.2 | Detail |
| CX1g001148 | 1:1,890,781-1,892,178 | - | C1H1g15125 | C2H1g07926 | LOC_Os01g04930 | Os01g0142500 | Os2R_MYB2 | Detail |
| CX1g001236 | 1:1,902,870-1,903,162 | + | - | - | - | Os01g0142600 | - | Detail |
| CX1g007203 | 1:1,905,253-1,907,172 | + | C1H1g12761 | C2H1g24212 | LOC_Os01g04950 | Os01g0142800 | - | Detail |
| CX1g003203 | 1:1,920,913-1,921,086 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g004805 | 1:1,926,366-1,926,638 | - | - | - | - | Os09g0276600 | - | Detail |
| CX1g001789 | 1:1,949,150-1,952,169 | - | C1H1g03229 | C2H1g05668 | LOC_Os01g04990 | Os01g0143100 | - | Detail |
| CX1g006394 | 1:1,955,037-1,955,932 | + | C1H1g29677 | C2H1g12663 | LOC_Os01g05000 | - | - | Detail |
| CX1g006849 | 1:1,960,391-1,962,853 | - | C1H1g24343 | C2H1g15469 | LOC_Os01g05020 | Os01g0143400 | - | Detail |
| CX1g004152 | 1:1,976,174-1,976,395 | - | - | C2H1g22860 | LOC_Os01g05064 | Os01g0143900 | - | Detail |
| CX1g005129 | 1:1,977,814-1,983,647 | - | C1H1g10063 | C2H1g23660 | LOC_Os01g05070 | Os01g0144000 | - | Detail |
| CX1g001193 | 1:1,985,293-1,986,459 | + | C1H1g07723 | C2H3g05697 | LOC_Os01g05090 | Os01g0144200 | - | Detail |
| CX1g000107 | 1:1,987,112-1,988,574 | - | C1H1g29569 | C2H1g12529 | LOC_Os01g05100 | Os01g0144300 | - | Detail |
| CX1g000964 | 1:1,989,784-1,995,434 | - | C1H1g20324 | C2H1g15155 | - | Os01g0144340 | - | Detail |
| CX1g006895 | 1:1,999,259-2,001,196 | - | C1H1g21842 | C2H1g26621 | LOC_Os01g05120 | Os01g0144500 | - | Detail |
| CX1g006746 | 1:2,001,899-2,004,305 | + | C1H1g24926 | C2H1g18449 | LOC_Os01g05130 | Os01g0144600 | - | Detail |
| CX1g003652 | 1:2,004,930-2,006,178 | + | C1H1g24429 | C2H1g12155 | LOC_Os01g05140 | Os01g0144700 | - | Detail |