| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08691 | 3:3,095,114-3,096,195 | - | C1H3g01458 | CX3g027399 | LOC_Os03g07010 | Os03g0735900 | OsRAM2 | Detail |
| C2H3g15876 | 3:3,097,825-3,098,514 | - | C1H3g01458 | CX3g027399 | LOC_Os03g07060 | Os03g0166600 | - | Detail |
| C2H3g12538 | 3:3,105,582-3,111,263 | + | C1H3g04033 | CX3g030094 | LOC_Os03g07080 | Os03g0166800 | - | Detail |
| C2H3g19555 | 3:3,113,798-3,115,328 | + | C1H3g18965 | CX3g030196 | LOC_Os03g07100 | Os03g0167000 | - | Detail |
| C2H3g13511 | 3:3,116,565-3,117,357 | + | C1H3g18624 | CX10g008216 | LOC_Os10g27174 | Os10g0411700 | - | Detail |
| C2H3g27991 | 3:3,117,507-3,121,829 | - | C1H3g05997 | CX3g025455 | LOC_Os03g07110 | Os03g0167200 | OsIQM2 | Detail |
| C2H3g02351 | 3:3,124,852-3,128,753 | + | C1H3g25407 | CX3g027989 | LOC_Os03g07120 | Os03g0167400 | - | Detail |
| C2H3g10661 | 3:3,133,286-3,138,036 | + | C1H3g07433 | CX3g026239 | LOC_Os03g07130 | Os03g0167500 | OsRMR3, OsRMR1, RMR1 | Detail |
| C2H3g14503 | 3:3,140,502-3,142,873 | + | C1H3g28690 | CX3g025251 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| C2H3g28808 | 3:3,143,155-3,143,415 | + | C1H3g28690 | CX3g025251 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| C2H3g20508 | 3:3,143,733-3,148,329 | - | C1H3g18783 | CX3g030776 | LOC_Os03g07150 | Os03g0167700 | OsPP2A-5 | Detail |
| C2H3g28397 | 3:3,150,226-3,155,148 | + | C1H3g01595 | CX3g026055 | LOC_Os03g07160 | Os03g0167800 | - | Detail |
| C2H3g21676 | 3:3,160,484-3,163,307 | + | C1H3g17186 | CX3g029636 | LOC_Os03g07170 | Os03g0168000 | - | Detail |
| C2H3g13648 | 3:3,163,879-3,165,258 | - | C1H3g09927 | CX3g029073 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| C2H3g15532 | 3:3,166,957-3,168,740 | + | C1H3g29196 | CX3g027260 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| C2H3g27665 | 3:3,169,208-3,171,489 | - | C1H3g00563 | CX3g028572 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| C2H3g04176 | 3:3,176,410-3,180,324 | + | C1H3g28864 | CX3g029392 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| C2H3g16262 | 3:3,181,126-3,182,817 | - | C1H3g15091 | CX3g030074 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| C2H3g22195 | 3:3,186,278-3,187,912 | - | C1H3g30181 | CX3g027344 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| C2H3g27571 | 3:3,188,361-3,190,292 | - | C1H3g19869 | CX3g025173 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045482 | 6:572,683-574,218 | + | C1H6g18928 | C2H6g27927 | LOC_Os06g02400 | Os06g0114366 | - | Detail |
| CX6g043867 | 6:574,397-575,405 | - | C1H6g24136 | C2H6g18175 | LOC_Os06g02410 | Os06g0114400 | - | Detail |
| CX6g043304 | 6:577,599-577,956 | - | C1H6g10030 | C2H6g08822 | LOC_Os06g02420 | Os06g0114500 | - | Detail |
| CX6g041821 | 6:580,214-583,359 | + | C1H6g00492 | C2H6g11904 | LOC_Os06g02430 | Os06g0114600 | - | Detail |
| CX6g042964 | 6:584,406-585,901 | + | C1H6g12736 | C2H6g02992 | - | Os06g0114650 | - | Detail |
| CX6g041642 | 6:586,228-588,653 | - | C1H6g02905 | C2H6g19943 | LOC_Os06g02440 | Os06g0114700 | - | Detail |
| CX6g045870 | 6:594,496-594,969 | + | - | C2H6g23984 | LOC_Os06g02460 | Os06g0115000 | - | Detail |
| CX6g041678 | 6:597,423-597,732 | + | C1H6g21455 | C2H6g28820 | LOC_Os06g02470 | Os06g0115100 | - | Detail |
| CX6g041471 | 6:599,415-601,340 | - | - | C2H6g05919 | LOC_Os06g02480 | Os06g0115200 | MHZ3 | Detail |
| CX6g041813 | 6:608,236-610,403 | - | C1H6g28760 | C2H6g27107 | LOC_Os06g02500 | Os06g0115400 | - | Detail |
| CX6g044551 | 6:610,957-612,568 | - | C1H6g13559 | C2H6g11330 | LOC_Os06g02510 | Os06g0115500 | - | Detail |
| CX6g042923 | 6:616,866-619,987 | + | C1H6g05893 | C2H6g06508 | LOC_Os06g02520 | Os06g0115600 | IPD3, OsIPD3, Osipd3, CYCLOPS, IPD3/CYCLOPS, OsCYCLOPS | Detail |
| CX6g044608 | 6:620,612-621,331 | - | C1H6g13072 | C2H6g04821 | LOC_Os06g02530 | Os06g0115700 | - | Detail |
| CX6g042491 | 6:622,256-623,919 | - | C1H6g29518 | C2H6g10122 | LOC_Os06g02540 | Os06g0115800 | - | Detail |
| CX6g041523 | 6:629,605-630,963 | + | C1H6g27877 | - | - | Os06g0116100 | - | Detail |
| CX6g045903 | 6:631,780-635,752 | + | C1H6g10274 | C2H6g10225 | LOC_Os06g02550 | Os06g0154500 | MAPK6, OsMAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, DSG1 | Detail |
| CX6g044989 | 6:637,475-640,027 | - | C1H6g15739 | C2H6g13300 | LOC_Os06g02560 | Os06g0116200 | OsGRF5 | Detail |
| CX6g041960 | 6:646,611-650,681 | - | C1H6g24770 | C2H6g03741 | LOC_Os06g02570 | Os06g0116300 | - | Detail |
| CX6g042572 | 6:652,578-653,880 | - | C1H6g02215 | C2H6g03499 | LOC_Os06g02580 | Os06g0116400 | - | Detail |
| CX6g044174 | 6:654,442-655,191 | + | - | C2H6g20867 | - | - | - | Detail |