| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09563 | 1:25,515,887-25,517,528 | + | C1H1g29386 | CX1g001085 | LOC_Os01g49820 | Os01g0693300 | - | Detail |
| C2H1g14365 | 1:25,574,489-25,576,712 | - | C1H1g28615 | CX1g006741 | LOC_Os01g49900 | Os01g0693900 | - | Detail |
| C2H1g09264 | 1:25,581,027-25,584,323 | + | C1H1g20356 | CX1g002422 | LOC_Os01g49910 | Os01g0694000 | - | Detail |
| C2H1g01798 | 1:25,585,503-25,588,955 | + | C1H1g10906 | CX1g005199 | LOC_Os01g49920 | Os01g0694100 | - | Detail |
| C2H1g29437 | 1:25,590,982-25,595,590 | - | C1H1g14019 | CX1g005889 | LOC_Os01g49930 | Os01g0694200 | - | Detail |
| C2H1g02878 | 1:25,599,395-25,614,726 | - | C1H1g11575 | CX1g000910 | LOC_Os01g49940 | Os01g0694300 | - | Detail |
| C2H1g12436 | 1:25,623,513-25,629,371 | + | C1H1g23983 | CX1g003379 | LOC_Os01g50010 | Os01g0694900 | - | Detail |
| C2H1g09448 | 1:25,630,444-25,635,380 | + | C1H1g09854 | CX1g006314 | LOC_Os01g50032 | Os01g0695100 | OsPEAMT1 | Detail |
| C2H1g20938 | 1:25,637,468-25,641,622 | + | C1H1g24840 | CX1g000495 | LOC_Os01g50040 | Os01g0695200 | - | Detail |
| C2H1g12268 | 1:25,642,374-25,645,425 | - | C1H1g15839 | CX1g005052 | LOC_Os01g50050 | Os01g0695300 | OsFPS3 | Detail |
| C2H1g10720 | 1:25,646,281-25,648,972 | - | C1H1g09427 | CX1g001238 | LOC_Os01g50060 | Os01g0695600 | - | Detail |
| C2H1g19234 | 1:25,660,021-25,671,265 | + | C1H1g28535 | CX1g000682 | LOC_Os01g50080 | Os01g0290700 | - | Detail |
| C2H1g29650 | 1:25,671,761-25,672,246 | + | C1H1g24452 | CX1g004640 | - | - | - | Detail |
| C2H1g26297 | 1:25,673,106-25,679,579 | - | C1H1g20551 | CX1g004821 | LOC_Os01g50100 | Os01g0695800 | - | Detail |
| C2H1g18904 | 1:25,689,624-25,690,797 | + | C1H1g28063 | CX1g003608 | LOC_Os01g50110 | Os01g0695900 | Os2R_MYB11 | Detail |
| C2H1g25152 | 1:25,692,266-25,693,954 | + | C1H1g21196 | CX1g004393 | LOC_Os01g50120 | Os01g0696000 | - | Detail |
| C2H1g29550 | 1:25,694,361-25,695,957 | - | C1H1g00928 | CX1g001262 | - | Os01g0696100 | - | Detail |
| C2H1g29725 | 1:25,709,468-25,716,463 | + | C1H1g28913 | CX1g003854 | LOC_Os01g50160 | Os01g0290700 | - | Detail |
| C2H1g21453 | 1:25,738,425-25,739,296 | - | C1H1g01002 | CX1g006665 | LOC_Os01g50259 | Os01g0697700 | - | Detail |
| C2H1g03629 | 1:25,740,336-25,740,851 | - | C1H1g31100 | CX1g006665 | LOC_Os01g50259 | Os01g0697400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045482 | 6:572,683-574,218 | + | C1H6g18928 | C2H6g27927 | LOC_Os06g02400 | Os06g0114366 | - | Detail |
| CX6g043867 | 6:574,397-575,405 | - | C1H6g24136 | C2H6g18175 | LOC_Os06g02410 | Os06g0114400 | - | Detail |
| CX6g043304 | 6:577,599-577,956 | - | C1H6g10030 | C2H6g08822 | LOC_Os06g02420 | Os06g0114500 | - | Detail |
| CX6g041821 | 6:580,214-583,359 | + | C1H6g00492 | C2H6g11904 | LOC_Os06g02430 | Os06g0114600 | - | Detail |
| CX6g042964 | 6:584,406-585,901 | + | C1H6g12736 | C2H6g02992 | - | Os06g0114650 | - | Detail |
| CX6g041642 | 6:586,228-588,653 | - | C1H6g02905 | C2H6g19943 | LOC_Os06g02440 | Os06g0114700 | - | Detail |
| CX6g045870 | 6:594,496-594,969 | + | - | C2H6g23984 | LOC_Os06g02460 | Os06g0115000 | - | Detail |
| CX6g041678 | 6:597,423-597,732 | + | C1H6g21455 | C2H6g28820 | LOC_Os06g02470 | Os06g0115100 | - | Detail |
| CX6g041471 | 6:599,415-601,340 | - | - | C2H6g05919 | LOC_Os06g02480 | Os06g0115200 | MHZ3 | Detail |
| CX6g041813 | 6:608,236-610,403 | - | C1H6g28760 | C2H6g27107 | LOC_Os06g02500 | Os06g0115400 | - | Detail |
| CX6g044551 | 6:610,957-612,568 | - | C1H6g13559 | C2H6g11330 | LOC_Os06g02510 | Os06g0115500 | - | Detail |
| CX6g042923 | 6:616,866-619,987 | + | C1H6g05893 | C2H6g06508 | LOC_Os06g02520 | Os06g0115600 | IPD3, OsIPD3, Osipd3, CYCLOPS, IPD3/CYCLOPS, OsCYCLOPS | Detail |
| CX6g044608 | 6:620,612-621,331 | - | C1H6g13072 | C2H6g04821 | LOC_Os06g02530 | Os06g0115700 | - | Detail |
| CX6g042491 | 6:622,256-623,919 | - | C1H6g29518 | C2H6g10122 | LOC_Os06g02540 | Os06g0115800 | - | Detail |
| CX6g041523 | 6:629,605-630,963 | + | C1H6g27877 | - | - | Os06g0116100 | - | Detail |
| CX6g045903 | 6:631,780-635,752 | + | C1H6g10274 | C2H6g10225 | LOC_Os06g02550 | Os06g0154500 | MAPK6, OsMAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, DSG1 | Detail |
| CX6g044989 | 6:637,475-640,027 | - | C1H6g15739 | C2H6g13300 | LOC_Os06g02560 | Os06g0116200 | OsGRF5 | Detail |
| CX6g041960 | 6:646,611-650,681 | - | C1H6g24770 | C2H6g03741 | LOC_Os06g02570 | Os06g0116300 | - | Detail |
| CX6g042572 | 6:652,578-653,880 | - | C1H6g02215 | C2H6g03499 | LOC_Os06g02580 | Os06g0116400 | - | Detail |
| CX6g044174 | 6:654,442-655,191 | + | - | C2H6g20867 | - | - | - | Detail |