| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25653 | 4:27,851,691-27,853,962 | - | C1H4g19935 | - | LOC_Os04g53994 | Os04g0631800 | SDK6 | Detail |
| C2H4g21537 | 4:27,854,003-27,855,188 | - | - | - | - | - | - | Detail |
| C2H4g11451 | 4:27,855,794-27,859,015 | - | C1H4g25547 | - | LOC_Os04g54002 | Os04g0632500 | SDRLK-30 | Detail |
| C2H4g24371 | 4:27,860,722-27,862,787 | - | C1H4g07808 | - | LOC_Os04g54120 | Os04g0633800 | SDK9 | Detail |
| C2H4g10316 | 4:27,865,488-27,870,988 | - | C1H4g10768 | - | LOC_Os04g54020 | Os04g0632901 | SDK8 | Detail |
| C2H4g11371 | 4:27,874,078-27,877,948 | - | C1H4g17762 | - | LOC_Os04g54070 | Os04g0633200 | SDRLK-53 | Detail |
| C2H4g08151 | 4:27,880,678-27,883,681 | - | C1H4g22937 | - | LOC_Os04g54080 | Os04g0633300 | SDRLK-54 | Detail |
| C2H4g00649 | 4:27,886,623-27,887,974 | - | C1H4g30209 | CX9g057667 | LOC_Os04g53994 | Os04g0633600 | SDK14 | Detail |
| C2H4g25413 | 4:27,888,520-27,889,827 | - | C1H4g30209 | - | LOC_Os04g54110 | Os04g0633600 | SDK14 | Detail |
| C2H4g16118 | 4:27,896,002-27,897,641 | - | C1H4g27111 | - | LOC_Os04g54120 | Os04g0633800 | SDK9 | Detail |
| C2H4g07076 | 4:27,903,417-27,903,605 | - | C1H4g31127 | - | LOC_Os04g54120 | Os04g0226600 | SDK5 | Detail |
| C2H4g20208 | 4:27,904,217-27,905,119 | - | C1H4g17491 | - | LOC_Os04g54130 | Os04g0633900 | SDRLK-31 | Detail |
| C2H4g27225 | 4:27,905,393-27,908,367 | - | C1H4g01666 | - | LOC_Os04g54130 | Os04g0633900 | SDRLK-31 | Detail |
| C2H4g05742 | 4:27,909,572-27,909,856 | - | C1H4g16811 | - | LOC_Os04g54140 | Os04g0634000 | SDRLK-32 | Detail |
| C2H4g12541 | 4:27,910,101-27,913,306 | - | C1H4g05600 | - | LOC_Os04g54140 | Os04g0634000 | SDRLK-32 | Detail |
| C2H4g05234 | 4:27,914,629-27,917,959 | - | C1H4g00149 | - | LOC_Os04g54180 | Os04g0634400 | SDK10 | Detail |
| C2H4g15094 | 4:27,918,622-27,921,941 | - | C1H4g30311 | - | LOC_Os04g54190 | Os04g0634500 | OsRLCK166 | Detail |
| C2H4g23622 | 4:27,925,058-27,930,126 | + | C1H4g18527 | CX4g034564 | LOC_Os04g54200 | Os04g0634700 | OsDGK1, OsBIDK1 | Detail |
| C2H4g02149 | 4:27,931,115-27,931,387 | + | - | CX4g034330 | LOC_Os04g54210 | Os04g0634800 | - | Detail |
| C2H4g22519 | 4:27,932,295-27,932,552 | - | - | CX4g031499 | LOC_Os04g54220 | Os04g0634900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039789 | 5:24,897,005-24,897,337 | + | C1H6g06805 | C2H5g08054 | - | Os05g0429100 | - | Detail |
| CX5g037161 | 5:24,897,848-24,901,711 | - | C1H5g24835 | C2H5g23094 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| CX5g037472 | 5:24,904,550-24,905,274 | - | C1H5g11204 | C2H5g15029 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g037109 | 5:24,906,276-24,907,892 | + | C1H5g19628 | C2H5g10878 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| CX5g040213 | 5:24,910,202-24,911,057 | - | C1H5g15344 | C2H5g03677 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| CX5g038377 | 5:24,917,569-24,918,723 | + | C1H5g05425 | C2H5g02505 | LOC_Os05g51780 | Os05g0596500 | - | Detail |
| CX5g038266 | 5:24,928,817-24,940,972 | - | C1H5g04142 | C2H5g19295 | LOC_Os05g51790 | Os05g0596600 | OsSMC5 | Detail |
| CX5g040422 | 5:24,942,469-24,945,971 | + | C1H5g09886 | C2H5g24076 | LOC_Os05g51800 | Os05g0596700 | - | Detail |
| CX5g039358 | 5:24,947,896-24,948,717 | + | C1H5g06124 | C2H5g17322 | LOC_Os05g51820 | Os05g0597000 | OsMUTE | Detail |
| CX5g038345 | 5:24,951,848-24,953,506 | - | C1H5g15760 | C2H5g24478 | LOC_Os05g51830 | Os05g0597100 | HDT1, OsHDT1, HDT701 | Detail |
| CX5g038501 | 5:24,957,547-24,959,562 | - | C1H5g16210 | C2H5g14678 | LOC_Os05g51850 | Os05g0597200 | - | Detail |
| CX5g040358 | 5:24,961,090-24,962,978 | + | C1H5g10848 | C2H5g20513 | LOC_Os05g51860 | Os05g0597400 | - | Detail |
| CX5g038259 | 5:24,963,060-24,963,503 | - | - | - | - | - | - | Detail |
| CX5g039366 | 5:24,991,587-24,991,841 | - | C1H5g07885 | C2H5g12335 | LOC_Os05g51900 | Os05g0597700 | - | Detail |
| CX5g038296 | 5:24,992,491-24,992,853 | + | - | - | - | - | - | Detail |
| CX5g038387 | 5:24,996,923-24,997,636 | - | - | C2H5g02897 | LOC_Os05g51910 | - | - | Detail |
| CX6g041728 | 6:27,683-34,100 | + | C1H6g09491 | C2H6g15066 | LOC_Os06g01170 | Os06g0101000 | - | Detail |
| CX6g043815 | 6:34,921-35,942 | + | C1H6g01140 | C2H6g27611 | LOC_Os06g01180 | Os06g0101100 | - | Detail |
| CX6g043521 | 6:37,279-38,307 | + | C1H6g30354 | C2H6g21763 | LOC_Os06g01200 | Os06g0101300 | - | Detail |
| CX6g041212 | 6:43,972-44,436 | - | - | C2H6g25304 | LOC_Os06g01210 | Os06g0101600 | - | Detail |