| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g01022 | 5:22,766,366-22,773,270 | - | C1H5g10839 | CX5g036928 | LOC_Os05g47550 | Os05g0549000 | - | Detail |
| C2H5g00365 | 5:22,775,804-22,779,701 | - | C1H5g10095 | CX5g040729 | LOC_Os05g47560 | Os05g0549100 | - | Detail |
| C2H5g19106 | 5:22,791,561-22,795,902 | + | C1H5g29124 | CX5g036837 | - | - | - | Detail |
| C2H5g02863 | 5:22,796,653-22,813,129 | - | - | - | - | - | - | Detail |
| C2H5g12244 | 5:22,813,947-22,814,960 | + | C1H5g05047 | CX1g003738 | LOC_Os05g47580 | Os05g0549300 | - | Detail |
| C2H5g14920 | 5:22,821,965-22,824,814 | + | C1H5g23911 | CX5g039498 | LOC_Os05g47630 | Os05g0549600 | - | Detail |
| C2H5g22501 | 5:22,825,557-22,827,116 | + | C1H5g02487 | CX5g038154 | LOC_Os05g47640 | Os05g0549700 | - | Detail |
| C2H5g14796 | 5:22,840,229-22,841,404 | + | C1H5g09801 | CX5g037227 | LOC_Os05g47650 | Os05g0549800 | OsRAV12 | Detail |
| C2H5g00683 | 5:22,848,094-22,850,982 | - | C1H5g13048 | CX5g038879 | LOC_Os05g47660 | Os05g0549900 | - | Detail |
| C2H5g15975 | 5:22,849,250-22,849,450 | + | - | - | - | Os05g0549850 | - | Detail |
| C2H5g14326 | 5:22,851,042-22,851,521 | - | C1H5g31388 | CX5g038879 | LOC_Os05g47660 | Os05g0549900 | - | Detail |
| C2H5g06469 | 5:22,855,267-22,858,010 | + | C1H5g29449 | CX5g038362 | LOC_Os05g47670 | Os05g0550000 | - | Detail |
| C2H5g21681 | 5:22,858,336-22,860,690 | - | C1H5g11690 | CX5g039534 | LOC_Os05g47680 | Os05g0550100 | - | Detail |
| C2H5g26670 | 5:22,861,509-22,862,898 | - | C1H5g16547 | CX5g037514 | LOC_Os05g47690 | Os05g0550250 | - | Detail |
| C2H5g18660 | 5:22,865,149-22,865,439 | + | C1H5g30856 | CX5g038208 | LOC_Os05g47700 | Os05g0550300 | - | Detail |
| C2H5g15027 | 5:22,869,306-22,869,596 | + | C1H5g29709 | CX5g038446 | LOC_Os05g47730 | Os05g0550600 | - | Detail |
| C2H5g25369 | 5:22,869,962-22,878,097 | - | C1H5g12523 | CX5g038507 | LOC_Os05g47750 | Os05g0550700 | - | Detail |
| C2H5g08122 | 5:22,881,870-22,882,724 | + | C1H5g14447 | CX5g037911 | LOC_Os05g47770 | Os05g0550800 | - | Detail |
| C2H5g16301 | 5:22,884,602-22,888,573 | + | C1H5g23339 | CX5g037911 | LOC_Os05g47770 | Os05g0550800 | - | Detail |
| C2H5g06502 | 5:22,896,053-22,904,635 | + | C1H5g00731 | CX5g040704 | LOC_Os05g47780 | Os05g0551000 | OsHRZ2, CLG1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039789 | 5:24,897,005-24,897,337 | + | C1H6g06805 | C2H5g08054 | - | Os05g0429100 | - | Detail |
| CX5g037161 | 5:24,897,848-24,901,711 | - | C1H5g24835 | C2H5g23094 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| CX5g037472 | 5:24,904,550-24,905,274 | - | C1H5g11204 | C2H5g15029 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g037109 | 5:24,906,276-24,907,892 | + | C1H5g19628 | C2H5g10878 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| CX5g040213 | 5:24,910,202-24,911,057 | - | C1H5g15344 | C2H5g03677 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| CX5g038377 | 5:24,917,569-24,918,723 | + | C1H5g05425 | C2H5g02505 | LOC_Os05g51780 | Os05g0596500 | - | Detail |
| CX5g038266 | 5:24,928,817-24,940,972 | - | C1H5g04142 | C2H5g19295 | LOC_Os05g51790 | Os05g0596600 | OsSMC5 | Detail |
| CX5g040422 | 5:24,942,469-24,945,971 | + | C1H5g09886 | C2H5g24076 | LOC_Os05g51800 | Os05g0596700 | - | Detail |
| CX5g039358 | 5:24,947,896-24,948,717 | + | C1H5g06124 | C2H5g17322 | LOC_Os05g51820 | Os05g0597000 | OsMUTE | Detail |
| CX5g038345 | 5:24,951,848-24,953,506 | - | C1H5g15760 | C2H5g24478 | LOC_Os05g51830 | Os05g0597100 | HDT1, OsHDT1, HDT701 | Detail |
| CX5g038501 | 5:24,957,547-24,959,562 | - | C1H5g16210 | C2H5g14678 | LOC_Os05g51850 | Os05g0597200 | - | Detail |
| CX5g040358 | 5:24,961,090-24,962,978 | + | C1H5g10848 | C2H5g20513 | LOC_Os05g51860 | Os05g0597400 | - | Detail |
| CX5g038259 | 5:24,963,060-24,963,503 | - | - | - | - | - | - | Detail |
| CX5g039366 | 5:24,991,587-24,991,841 | - | C1H5g07885 | C2H5g12335 | LOC_Os05g51900 | Os05g0597700 | - | Detail |
| CX5g038296 | 5:24,992,491-24,992,853 | + | - | - | - | - | - | Detail |
| CX5g038387 | 5:24,996,923-24,997,636 | - | - | C2H5g02897 | LOC_Os05g51910 | - | - | Detail |
| CX6g041728 | 6:27,683-34,100 | + | C1H6g09491 | C2H6g15066 | LOC_Os06g01170 | Os06g0101000 | - | Detail |
| CX6g043815 | 6:34,921-35,942 | + | C1H6g01140 | C2H6g27611 | LOC_Os06g01180 | Os06g0101100 | - | Detail |
| CX6g043521 | 6:37,279-38,307 | + | C1H6g30354 | C2H6g21763 | LOC_Os06g01200 | Os06g0101300 | - | Detail |
| CX6g041212 | 6:43,972-44,436 | - | - | C2H6g25304 | LOC_Os06g01210 | Os06g0101600 | - | Detail |