| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24692 | 2:23,261,898-23,264,753 | - | C2H2g28960 | CX2g019549 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| C1H2g28052 | 2:23,272,060-23,273,777 | - | C2H2g23490 | - | LOC_Os02g41490 | - | - | Detail |
| C1H2g10845 | 2:23,274,791-23,276,783 | - | C2H2g09222 | CX2g019549 | LOC_Os02g41500 | Os02g0623932 | - | Detail |
| C1H2g31771 | 2:23,276,819-23,277,253 | - | C2H2g05626 | CX2g019332 | LOC_Os02g41500 | Os02g0624100 | - | Detail |
| C1H2g14607 | 2:23,283,546-23,284,442 | - | C2H2g21291 | CX2g020985 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| C1H2g25292 | 2:23,296,362-23,301,852 | + | C2H2g15398 | CX2g019605 | LOC_Os02g41520 | Os02g0624400 | - | Detail |
| C1H2g21346 | 2:23,305,811-23,312,212 | + | C2H2g09545 | CX2g021076 | LOC_Os02g41550 | Os02g0625000 | - | Detail |
| C1H2g30957 | 2:23,315,370-23,315,628 | - | - | - | - | - | - | Detail |
| C1H2g23857 | 2:23,315,683-23,315,897 | - | - | - | - | - | - | Detail |
| C1H2g17897 | 2:23,331,977-23,333,420 | + | C2H2g18059 | CX2g019216 | LOC_Os02g41580 | Os02g0625300 | - | Detail |
| C1H2g11053 | 2:23,337,994-23,343,678 | - | C2H2g11933 | CX2g019321 | LOC_Os02g41590 | Os02g0625500 | - | Detail |
| C1H2g01239 | 2:23,350,642-23,357,309 | + | C2H2g22654 | CX2g021369 | LOC_Os02g41610 | Os02g0625900 | - | Detail |
| C1H2g24503 | 2:23,367,290-23,371,213 | - | C2H2g12458 | CX2g019721 | LOC_Os02g41630 | Os02g0626100 | - | Detail |
| C1H2g10363 | 2:23,379,727-23,384,648 | - | C2H2g01685 | CX2g021604 | LOC_Os02g41650 | Os02g0626400 | - | Detail |
| C1H2g23853 | 2:23,388,069-23,390,210 | - | C2H2g30462 | CX2g023963 | LOC_Os02g41670 | Os02g0626600 | PAL3 | Detail |
| C1H2g05283 | 2:23,393,200-23,395,822 | - | C2H2g15020 | CX2g024160 | LOC_Os02g41680 | Os02g0627100 | OsPAL4 | Detail |
| C1H2g07931 | 2:23,415,975-23,418,774 | + | C2H2g27127 | CX2g021913 | LOC_Os02g41710 | Os02g0627700 | OsCNGC7 | Detail |
| C1H2g13176 | 2:23,419,344-23,420,940 | - | C2H2g10818 | CX2g021975 | LOC_Os02g41760 | Os02g0627900 | - | Detail |
| C1H2g03519 | 2:23,426,139-23,429,154 | + | C2H2g11015 | CX2g024868 | LOC_Os02g41770 | Os02g0628000 | - | Detail |
| C1H2g23138 | 2:23,435,330-23,439,285 | + | C2H2g16036 | CX2g021958 | LOC_Os02g41780 | Os02g0628200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039789 | 5:24,897,005-24,897,337 | + | C1H6g06805 | C2H5g08054 | - | Os05g0429100 | - | Detail |
| CX5g037161 | 5:24,897,848-24,901,711 | - | C1H5g24835 | C2H5g23094 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| CX5g037472 | 5:24,904,550-24,905,274 | - | C1H5g11204 | C2H5g15029 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g037109 | 5:24,906,276-24,907,892 | + | C1H5g19628 | C2H5g10878 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| CX5g040213 | 5:24,910,202-24,911,057 | - | C1H5g15344 | C2H5g03677 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| CX5g038377 | 5:24,917,569-24,918,723 | + | C1H5g05425 | C2H5g02505 | LOC_Os05g51780 | Os05g0596500 | - | Detail |
| CX5g038266 | 5:24,928,817-24,940,972 | - | C1H5g04142 | C2H5g19295 | LOC_Os05g51790 | Os05g0596600 | OsSMC5 | Detail |
| CX5g040422 | 5:24,942,469-24,945,971 | + | C1H5g09886 | C2H5g24076 | LOC_Os05g51800 | Os05g0596700 | - | Detail |
| CX5g039358 | 5:24,947,896-24,948,717 | + | C1H5g06124 | C2H5g17322 | LOC_Os05g51820 | Os05g0597000 | OsMUTE | Detail |
| CX5g038345 | 5:24,951,848-24,953,506 | - | C1H5g15760 | C2H5g24478 | LOC_Os05g51830 | Os05g0597100 | HDT1, OsHDT1, HDT701 | Detail |
| CX5g038501 | 5:24,957,547-24,959,562 | - | C1H5g16210 | C2H5g14678 | LOC_Os05g51850 | Os05g0597200 | - | Detail |
| CX5g040358 | 5:24,961,090-24,962,978 | + | C1H5g10848 | C2H5g20513 | LOC_Os05g51860 | Os05g0597400 | - | Detail |
| CX5g038259 | 5:24,963,060-24,963,503 | - | - | - | - | - | - | Detail |
| CX5g039366 | 5:24,991,587-24,991,841 | - | C1H5g07885 | C2H5g12335 | LOC_Os05g51900 | Os05g0597700 | - | Detail |
| CX5g038296 | 5:24,992,491-24,992,853 | + | - | - | - | - | - | Detail |
| CX5g038387 | 5:24,996,923-24,997,636 | - | - | C2H5g02897 | LOC_Os05g51910 | - | - | Detail |
| CX6g041728 | 6:27,683-34,100 | + | C1H6g09491 | C2H6g15066 | LOC_Os06g01170 | Os06g0101000 | - | Detail |
| CX6g043815 | 6:34,921-35,942 | + | C1H6g01140 | C2H6g27611 | LOC_Os06g01180 | Os06g0101100 | - | Detail |
| CX6g043521 | 6:37,279-38,307 | + | C1H6g30354 | C2H6g21763 | LOC_Os06g01200 | Os06g0101300 | - | Detail |
| CX6g041212 | 6:43,972-44,436 | - | - | C2H6g25304 | LOC_Os06g01210 | Os06g0101600 | - | Detail |