| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09684 | 6:900,508-903,045 | - | C2H6g20246 | CX6g044942 | LOC_Os06g03610 | Os06g0126250 | RLCK193, RUPO | Detail |
| C1H6g19250 | 6:906,414-907,289 | - | C2H6g02139 | CX6g044825 | LOC_Os06g03630 | Os06g0126400 | - | Detail |
| C1H6g26374 | 6:914,028-916,344 | + | C2H6g10074 | CX6g044771 | LOC_Os06g03640 | Os06g0126500 | OsBAG3 | Detail |
| C1H6g08039 | 6:922,093-924,832 | + | C2H6g16457 | CX6g044567 | LOC_Os06g03660 | Os06g0127000 | PEX11-5, OsPEX11-5 | Detail |
| C1H6g24795 | 6:929,693-930,355 | + | C2H6g24498 | CX6g043830 | LOC_Os06g03670 | Os06g0127100 | OsDREB1C | Detail |
| C1H6g30204 | 6:933,003-939,612 | - | C2H6g22226 | CX6g042948 | LOC_Os06g03676 | Os06g0127200 | - | Detail |
| C1H6g11151 | 6:939,958-943,099 | - | C2H6g14783 | CX6g043338 | LOC_Os06g03682 | Os06g0127300 | - | Detail |
| C1H6g14007 | 6:953,097-955,701 | + | C2H6g24069 | CX6g045340 | LOC_Os06g03690 | Os06g0127500 | - | Detail |
| C1H6g10479 | 6:957,024-959,930 | - | C2H6g20245 | CX8g051603 | - | - | - | Detail |
| C1H6g17810 | 6:960,617-965,194 | + | C2H6g30624 | CX6g041519 | LOC_Os06g03700 | Os06g0127700 | - | Detail |
| C1H6g26548 | 6:982,172-982,921 | + | C2H6g15477 | CX6g044568 | LOC_Os06g03750 | Os06g0128100 | - | Detail |
| C1H6g20127 | 6:983,248-986,761 | + | C2H6g15477 | CX6g044568 | LOC_Os06g03750 | Os06g0128100 | - | Detail |
| C1H6g31210 | 6:987,365-991,986 | - | C2H6g13317 | CX6g041448 | LOC_Os06g03760 | Os06g0128200 | - | Detail |
| C1H6g28537 | 6:994,354-1,003,216 | - | C2H6g29378 | CX6g043010 | LOC_Os06g03770 | Os06g0128300 | - | Detail |
| C1H6g23444 | 6:1,006,111-1,007,283 | - | C2H7g25936 | - | - | - | - | Detail |
| C1H6g09585 | 6:1,008,782-1,009,055 | - | - | - | - | - | - | Detail |
| C1H6g00903 | 6:1,011,717-1,017,097 | - | C2H1g06257 | CX12g017215 | LOC_Os08g15600 | - | - | Detail |
| C1H6g12756 | 6:1,018,358-1,025,760 | + | C2H6g10322 | CX6g042444 | LOC_Os06g03780 | Os06g0128400 | - | Detail |
| C1H6g04394 | 6:1,026,609-1,029,735 | + | C2H6g09883 | - | LOC_Os06g03790 | Os06g0128500 | - | Detail |
| C1H6g21402 | 6:1,034,510-1,039,764 | + | C2H6g03007 | CX6g042396 | LOC_Os06g03800 | Os06g0128600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039789 | 5:24,897,005-24,897,337 | + | C1H6g06805 | C2H5g08054 | - | Os05g0429100 | - | Detail |
| CX5g037161 | 5:24,897,848-24,901,711 | - | C1H5g24835 | C2H5g23094 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| CX5g037472 | 5:24,904,550-24,905,274 | - | C1H5g11204 | C2H5g15029 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g037109 | 5:24,906,276-24,907,892 | + | C1H5g19628 | C2H5g10878 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| CX5g040213 | 5:24,910,202-24,911,057 | - | C1H5g15344 | C2H5g03677 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| CX5g038377 | 5:24,917,569-24,918,723 | + | C1H5g05425 | C2H5g02505 | LOC_Os05g51780 | Os05g0596500 | - | Detail |
| CX5g038266 | 5:24,928,817-24,940,972 | - | C1H5g04142 | C2H5g19295 | LOC_Os05g51790 | Os05g0596600 | OsSMC5 | Detail |
| CX5g040422 | 5:24,942,469-24,945,971 | + | C1H5g09886 | C2H5g24076 | LOC_Os05g51800 | Os05g0596700 | - | Detail |
| CX5g039358 | 5:24,947,896-24,948,717 | + | C1H5g06124 | C2H5g17322 | LOC_Os05g51820 | Os05g0597000 | OsMUTE | Detail |
| CX5g038345 | 5:24,951,848-24,953,506 | - | C1H5g15760 | C2H5g24478 | LOC_Os05g51830 | Os05g0597100 | HDT1, OsHDT1, HDT701 | Detail |
| CX5g038501 | 5:24,957,547-24,959,562 | - | C1H5g16210 | C2H5g14678 | LOC_Os05g51850 | Os05g0597200 | - | Detail |
| CX5g040358 | 5:24,961,090-24,962,978 | + | C1H5g10848 | C2H5g20513 | LOC_Os05g51860 | Os05g0597400 | - | Detail |
| CX5g038259 | 5:24,963,060-24,963,503 | - | - | - | - | - | - | Detail |
| CX5g039366 | 5:24,991,587-24,991,841 | - | C1H5g07885 | C2H5g12335 | LOC_Os05g51900 | Os05g0597700 | - | Detail |
| CX5g038296 | 5:24,992,491-24,992,853 | + | - | - | - | - | - | Detail |
| CX5g038387 | 5:24,996,923-24,997,636 | - | - | C2H5g02897 | LOC_Os05g51910 | - | - | Detail |
| CX6g041728 | 6:27,683-34,100 | + | C1H6g09491 | C2H6g15066 | LOC_Os06g01170 | Os06g0101000 | - | Detail |
| CX6g043815 | 6:34,921-35,942 | + | C1H6g01140 | C2H6g27611 | LOC_Os06g01180 | Os06g0101100 | - | Detail |
| CX6g043521 | 6:37,279-38,307 | + | C1H6g30354 | C2H6g21763 | LOC_Os06g01200 | Os06g0101300 | - | Detail |
| CX6g041212 | 6:43,972-44,436 | - | - | C2H6g25304 | LOC_Os06g01210 | Os06g0101600 | - | Detail |