| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19430 | 3:15,080,469-15,086,406 | + | C1H3g22073 | CX3g028877 | LOC_Os03g29180 | Os03g0405100 | - | Detail |
| C2H3g25754 | 3:15,091,238-15,096,992 | + | C1H3g16781 | CX3g028390 | LOC_Os03g29190 | Os03g0405500 | - | Detail |
| C2H3g20515 | 3:15,099,338-15,100,540 | + | C1H3g17133 | - | - | Os03g0405550 | - | Detail |
| C2H3g04139 | 3:15,114,141-15,117,818 | + | C1H3g04698 | CX3g029381 | LOC_Os03g29240 | Os03g0405900 | RRA3 | Detail |
| C2H3g28132 | 3:15,137,826-15,138,670 | + | C1H3g28025 | CX3g028079 | LOC_Os03g29250 | Os03g0406100 | OsSPX5 | Detail |
| C2H3g00155 | 3:15,148,759-15,152,299 | + | C1H3g14233 | CX3g025201 | LOC_Os03g29260 | Os03g0406200 | - | Detail |
| C2H3g23059 | 3:15,193,603-15,197,174 | + | C1H3g31034 | CX3g026877 | LOC_Os03g29340 | Os03g0406900 | OsMac4 | Detail |
| C2H3g26359 | 3:15,196,504-15,204,812 | - | C1H3g30818 | CX3g030450 | LOC_Os03g29350 | Os03g0407000 | - | Detail |
| C2H3g18043 | 3:15,227,805-15,230,360 | - | - | CX3g026274 | - | Os03g0407400 | GS3 | Detail |
| C2H3g08674 | 3:15,232,845-15,233,328 | - | C1H3g12617 | CX3g026274 | - | Os03g0407400 | GS3 | Detail |
| C2H3g00647 | 3:15,246,449-15,249,794 | - | C1H3g17471 | CX3g025160 | LOC_Os03g29410 | Os03g0407900 | - | Detail |
| C2H3g15951 | 3:15,286,336-15,290,992 | + | C1H3g10731 | CX3g027064 | LOC_Os03g29470 | Os03g0408500 | - | Detail |
| C2H3g04400 | 3:15,340,333-15,344,377 | - | C1H3g31871 | CX3g026777 | LOC_Os03g29570 | Os03g0409400 | - | Detail |
| C2H3g25735 | 3:15,345,030-15,347,893 | + | C1H3g21807 | CX3g031255 | LOC_Os03g29584 | - | - | Detail |
| C2H3g24065 | 3:15,365,947-15,369,263 | + | C1H3g12159 | CX3g031178 | LOC_Os03g29630 | Os03g0410100 | - | Detail |
| C2H3g24471 | 3:15,380,312-15,380,656 | - | C1H3g17148 | CX3g026992 | LOC_Os03g29680 | Os03g0410300 | - | Detail |
| C2H3g16726 | 3:15,394,716-15,397,705 | - | C1H3g03774 | CX3g028649 | LOC_Os03g29730 | Os03g0410700 | - | Detail |
| C2H3g26637 | 3:15,397,956-15,400,076 | + | C1H3g16818 | CX3g029764 | LOC_Os03g29740 | Os03g0410900 | - | Detail |
| C2H3g25819 | 3:15,406,691-15,412,809 | + | C1H3g23163 | CX3g026328 | LOC_Os03g29750 | Os03g0411000 | - | Detail |
| C2H3g03408 | 3:15,423,646-15,429,128 | + | C1H3g09595 | CX3g029428 | LOC_Os03g29760 | Os03g0411100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040878 | 5:24,759,328-24,762,980 | - | C1H5g06040 | C2H5g13073 | LOC_Os05g51530 | Os05g0593100 | - | Detail |
| CX5g039758 | 5:24,764,376-24,765,571 | - | C1H5g29585 | C2H5g03858 | LOC_Os05g51540 | Os05g0593200 | - | Detail |
| CX5g036829 | 5:24,767,372-24,777,608 | - | C1H5g12721 | C2H5g22607 | LOC_Os05g51550 | Os05g0593550 | - | Detail |
| CX5g038490 | 5:24,781,550-24,785,258 | - | C1H5g20997 | C2H5g29211 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| CX5g040981 | 5:24,789,059-24,790,492 | - | C1H5g28104 | C2H5g25800 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| CX5g037849 | 5:24,796,134-24,796,967 | - | C1H5g28669 | C2H5g28633 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| CX5g040080 | 5:24,797,747-24,802,993 | - | C1H5g07980 | C2H5g27012 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| CX5g039004 | 5:24,805,142-24,805,405 | - | - | - | - | - | - | Detail |
| CX5g038359 | 5:24,815,399-24,820,515 | - | C1H5g15566 | C2H5g24138 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| CX5g041019 | 5:24,821,261-24,821,428 | - | - | - | - | - | - | Detail |
| CX5g041049 | 5:24,830,231-24,836,256 | + | C1H5g26110 | C2H5g08909 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| CX5g039720 | 5:24,838,133-24,840,751 | - | C1H5g09316 | C2H5g25499 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| CX5g039507 | 5:24,844,710-24,845,282 | - | C1H5g07547 | C2H5g18619 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| CX5g040157 | 5:24,847,860-24,848,102 | + | - | C2H5g26605 | - | Os01g0184200 | - | Detail |
| CX5g037190 | 5:24,855,273-24,858,687 | + | C1H5g22966 | C2H5g04566 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| CX5g039657 | 5:24,862,860-24,863,594 | - | C1H5g17200 | C2H5g03425 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| CX5g036970 | 5:24,879,567-24,879,728 | + | - | - | - | - | - | Detail |
| CX5g037572 | 5:24,883,369-24,886,458 | + | C1H5g29705 | C2H5g00689 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| CX5g038125 | 5:24,887,467-24,890,023 | - | C1H5g10995 | C2H5g25216 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| CX5g041076 | 5:24,890,860-24,892,958 | - | C1H5g27674 | C2H5g14814 | LOC_Os05g51710 | Os05g0595500 | - | Detail |