| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08519 | 2:29,141,433-29,143,056 | + | C1H2g00252 | CX2g020923 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| C2H2g01748 | 2:29,147,906-29,148,339 | - | C1H2g13826 | - | LOC_Os02g51950 | Os02g0756100 | OsEPFL2 | Detail |
| C2H2g05080 | 2:29,152,297-29,153,223 | - | - | CX2g022296 | LOC_Os02g51970 | Os02g0756200 | - | Detail |
| C2H2g26812 | 2:29,156,931-29,157,872 | - | - | CX2g020271 | LOC_Os02g52000 | Os02g0756600 | - | Detail |
| C2H2g05361 | 2:29,162,413-29,163,399 | - | - | CX2g023021 | LOC_Os02g52010 | Os02g0756800 | - | Detail |
| C2H2g24893 | 2:29,167,598-29,168,533 | + | - | CX2g023021 | LOC_Os02g52040 | Os02g0757100 | - | Detail |
| C2H2g04860 | 2:29,170,382-29,170,867 | + | C1H2g18356 | CX2g023173 | LOC_Os02g52120 | - | - | Detail |
| C2H2g26225 | 2:29,181,681-29,184,421 | + | C1H2g11994 | CX2g020517 | LOC_Os02g52130 | Os02g0757700 | - | Detail |
| C2H2g01455 | 2:29,189,079-29,192,926 | - | C1H2g00307 | CX2g020566 | LOC_Os02g52140 | Os02g0757900 | - | Detail |
| C2H2g25477 | 2:29,193,325-29,194,091 | + | C1H2g27632 | CX2g023549 | LOC_Os02g52150 | Os02g0758000 | - | Detail |
| C2H2g06385 | 2:29,196,727-29,203,669 | + | C1H2g13642 | CX2g020363 | LOC_Os02g52160 | Os02g0758100 | - | Detail |
| C2H2g03849 | 2:29,205,721-29,206,956 | - | C1H11g05948 | - | - | - | - | Detail |
| C2H2g18730 | 2:29,206,981-29,207,538 | - | - | CX2g019906 | LOC_Os02g52170 | Os02g0758200 | - | Detail |
| C2H2g20568 | 2:29,214,455-29,215,381 | - | C1H2g09312 | CX2g018879 | LOC_Os02g52180 | Os02g0758800 | - | Detail |
| C2H2g15822 | 2:29,222,248-29,224,174 | - | C1H2g17070 | CX2g019685 | LOC_Os02g52190 | Os02g0759000 | OsbHLH048 | Detail |
| C2H2g05043 | 2:29,229,731-29,231,020 | + | C1H2g26668 | CX2g024667 | LOC_Os02g52210 | Os02g0759400 | OsATL38 | Detail |
| C2H2g17235 | 2:29,233,107-29,234,774 | + | C1H2g20944 | CX2g023989 | LOC_Os02g52220 | Os02g0759500 | - | Detail |
| C2H2g04549 | 2:29,242,219-29,245,361 | + | C1H2g18903 | CX2g021992 | LOC_Os02g52230 | Os02g0759700 | - | Detail |
| C2H2g21014 | 2:29,251,307-29,253,130 | - | - | CX2g023109 | LOC_Os02g52250 | Os02g0759800 | - | Detail |
| C2H2g22565 | 2:29,254,168-29,254,458 | - | - | - | - | Os02g0286500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040878 | 5:24,759,328-24,762,980 | - | C1H5g06040 | C2H5g13073 | LOC_Os05g51530 | Os05g0593100 | - | Detail |
| CX5g039758 | 5:24,764,376-24,765,571 | - | C1H5g29585 | C2H5g03858 | LOC_Os05g51540 | Os05g0593200 | - | Detail |
| CX5g036829 | 5:24,767,372-24,777,608 | - | C1H5g12721 | C2H5g22607 | LOC_Os05g51550 | Os05g0593550 | - | Detail |
| CX5g038490 | 5:24,781,550-24,785,258 | - | C1H5g20997 | C2H5g29211 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| CX5g040981 | 5:24,789,059-24,790,492 | - | C1H5g28104 | C2H5g25800 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| CX5g037849 | 5:24,796,134-24,796,967 | - | C1H5g28669 | C2H5g28633 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| CX5g040080 | 5:24,797,747-24,802,993 | - | C1H5g07980 | C2H5g27012 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| CX5g039004 | 5:24,805,142-24,805,405 | - | - | - | - | - | - | Detail |
| CX5g038359 | 5:24,815,399-24,820,515 | - | C1H5g15566 | C2H5g24138 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| CX5g041019 | 5:24,821,261-24,821,428 | - | - | - | - | - | - | Detail |
| CX5g041049 | 5:24,830,231-24,836,256 | + | C1H5g26110 | C2H5g08909 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| CX5g039720 | 5:24,838,133-24,840,751 | - | C1H5g09316 | C2H5g25499 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| CX5g039507 | 5:24,844,710-24,845,282 | - | C1H5g07547 | C2H5g18619 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| CX5g040157 | 5:24,847,860-24,848,102 | + | - | C2H5g26605 | - | Os01g0184200 | - | Detail |
| CX5g037190 | 5:24,855,273-24,858,687 | + | C1H5g22966 | C2H5g04566 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| CX5g039657 | 5:24,862,860-24,863,594 | - | C1H5g17200 | C2H5g03425 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| CX5g036970 | 5:24,879,567-24,879,728 | + | - | - | - | - | - | Detail |
| CX5g037572 | 5:24,883,369-24,886,458 | + | C1H5g29705 | C2H5g00689 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| CX5g038125 | 5:24,887,467-24,890,023 | - | C1H5g10995 | C2H5g25216 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| CX5g041076 | 5:24,890,860-24,892,958 | - | C1H5g27674 | C2H5g14814 | LOC_Os05g51710 | Os05g0595500 | - | Detail |