| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29981 | 5:21,291,258-21,291,632 | - | C1H5g03468 | - | LOC_Os05g43660 | Os05g0512301 | - | Detail |
| C2H5g13083 | 5:21,294,840-21,296,657 | - | C1H5g20040 | CX5g040726 | LOC_Os05g43670 | Os05g0512400 | - | Detail |
| C2H5g21303 | 5:21,297,654-21,300,340 | - | C1H5g16936 | - | LOC_Os05g43680 | Os05g0512500 | OsMRGBP | Detail |
| C2H5g03611 | 5:21,303,843-21,306,205 | + | C1H5g08173 | CX5g037888 | LOC_Os05g43690 | Os05g0512600 | - | Detail |
| C2H5g16900 | 5:21,320,767-21,323,227 | + | C1H5g02984 | CX5g039008 | LOC_Os05g43760 | Os05g0513100 | - | Detail |
| C2H5g24258 | 5:21,331,364-21,336,617 | + | C1H5g10552 | CX5g040071 | LOC_Os05g43770 | Os05g0513200 | - | Detail |
| C2H5g09149 | 5:21,338,727-21,341,608 | + | C1H5g13302 | CX5g039684 | LOC_Os05g43780 | Os05g0513350 | - | Detail |
| C2H5g26918 | 5:21,343,009-21,346,539 | + | C1H5g09663 | CX5g038930 | LOC_Os05g43790 | Os05g0513400 | - | Detail |
| C2H5g05557 | 5:21,350,747-21,352,114 | - | C1H5g15162 | CX5g036821 | LOC_Os05g43800 | Os05g0513600 | - | Detail |
| C2H5g13727 | 5:21,352,649-21,355,127 | - | C1H5g20443 | CX5g036949 | LOC_Os05g43810 | Os05g0513700 | - | Detail |
| C2H5g12600 | 5:21,358,927-21,360,693 | + | C1H5g18479 | CX5g036780 | LOC_Os05g43820 | Os05g0513800 | - | Detail |
| C2H5g13306 | 5:21,361,085-21,364,798 | - | C1H5g21593 | CX5g040516 | LOC_Os05g43830 | Os05g0513900 | - | Detail |
| C2H5g05539 | 5:21,369,293-21,370,828 | + | C1H5g29251 | CX5g039381 | LOC_Os05g43840 | Os05g0514200 | - | Detail |
| C2H5g17185 | 5:21,377,073-21,381,664 | + | C1H5g31291 | CX5g039707 | LOC_Os05g43850 | Os05g0514300 | - | Detail |
| C2H5g21883 | 5:21,383,909-21,386,056 | - | C1H5g31864 | CX5g039655 | LOC_Os05g43860 | Os05g0514400 | - | Detail |
| C2H5g27546 | 5:21,388,735-21,390,880 | + | C1H5g13883 | CX5g039558 | LOC_Os05g43870 | Os05g0514500 | - | Detail |
| C2H5g19387 | 5:21,395,993-21,397,147 | - | C1H5g27703 | CX5g037140 | LOC_Os05g43880 | Os05g0514600 | GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4 | Detail |
| C2H5g15452 | 5:21,409,934-21,410,179 | + | C1H5g12361 | CX5g039348 | LOC_Os05g43895 | Os05g0514800 | - | Detail |
| C2H5g22372 | 5:21,419,896-21,428,485 | + | C1H5g18846 | CX5g037416 | LOC_Os05g43910 | Os05g0515200 | - | Detail |
| C2H5g05053 | 5:21,437,495-21,442,944 | + | C1H5g31857 | CX5g037729 | LOC_Os05g43920 | Os05g0515400 | OsARF14, OsARF3la, OsARF3la/OsARF14 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040878 | 5:24,759,328-24,762,980 | - | C1H5g06040 | C2H5g13073 | LOC_Os05g51530 | Os05g0593100 | - | Detail |
| CX5g039758 | 5:24,764,376-24,765,571 | - | C1H5g29585 | C2H5g03858 | LOC_Os05g51540 | Os05g0593200 | - | Detail |
| CX5g036829 | 5:24,767,372-24,777,608 | - | C1H5g12721 | C2H5g22607 | LOC_Os05g51550 | Os05g0593550 | - | Detail |
| CX5g038490 | 5:24,781,550-24,785,258 | - | C1H5g20997 | C2H5g29211 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| CX5g040981 | 5:24,789,059-24,790,492 | - | C1H5g28104 | C2H5g25800 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| CX5g037849 | 5:24,796,134-24,796,967 | - | C1H5g28669 | C2H5g28633 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| CX5g040080 | 5:24,797,747-24,802,993 | - | C1H5g07980 | C2H5g27012 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| CX5g039004 | 5:24,805,142-24,805,405 | - | - | - | - | - | - | Detail |
| CX5g038359 | 5:24,815,399-24,820,515 | - | C1H5g15566 | C2H5g24138 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| CX5g041019 | 5:24,821,261-24,821,428 | - | - | - | - | - | - | Detail |
| CX5g041049 | 5:24,830,231-24,836,256 | + | C1H5g26110 | C2H5g08909 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| CX5g039720 | 5:24,838,133-24,840,751 | - | C1H5g09316 | C2H5g25499 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| CX5g039507 | 5:24,844,710-24,845,282 | - | C1H5g07547 | C2H5g18619 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| CX5g040157 | 5:24,847,860-24,848,102 | + | - | C2H5g26605 | - | Os01g0184200 | - | Detail |
| CX5g037190 | 5:24,855,273-24,858,687 | + | C1H5g22966 | C2H5g04566 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| CX5g039657 | 5:24,862,860-24,863,594 | - | C1H5g17200 | C2H5g03425 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| CX5g036970 | 5:24,879,567-24,879,728 | + | - | - | - | - | - | Detail |
| CX5g037572 | 5:24,883,369-24,886,458 | + | C1H5g29705 | C2H5g00689 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| CX5g038125 | 5:24,887,467-24,890,023 | - | C1H5g10995 | C2H5g25216 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| CX5g041076 | 5:24,890,860-24,892,958 | - | C1H5g27674 | C2H5g14814 | LOC_Os05g51710 | Os05g0595500 | - | Detail |