| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28299 | 5:22,170,070-22,171,101 | - | C1H5g17231 | CX5g038315 | LOC_Os05g45710 | Os05g0533500 | OsSAT1;3 | Detail |
| C2H5g13260 | 5:22,173,794-22,181,115 | + | C1H5g17232 | CX5g039556 | LOC_Os05g45720 | Os05g0533600 | SSIVB, OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2 | Detail |
| C2H5g03217 | 5:22,181,740-22,183,798 | + | C1H5g27858 | CX5g039089 | LOC_Os05g45730 | Os05g0533700 | - | Detail |
| C2H5g09746 | 5:22,184,871-22,186,393 | + | C1H5g22620 | CX5g038471 | LOC_Os05g45740 | Os05g0533800 | - | Detail |
| C2H5g27500 | 5:22,187,563-22,191,307 | + | C1H5g12717 | CX5g038527 | LOC_Os05g45750 | Os05g0533900 | - | Detail |
| C2H5g28882 | 5:22,191,750-22,193,669 | - | C1H5g28841 | CX5g040105 | LOC_Os05g45760 | Os05g0534000 | - | Detail |
| C2H5g06715 | 5:22,194,656-22,196,891 | + | C1H5g15352 | CX5g036728 | LOC_Os05g45770 | Os05g0534100 | - | Detail |
| C2H5g12404 | 5:22,208,576-22,210,028 | + | C1H5g21827 | CX5g040749 | LOC_Os05g45810 | Os05g0534400 | OsCBL4 | Detail |
| C2H5g20385 | 5:22,210,537-22,213,936 | - | C1H5g13213 | CX5g037499 | LOC_Os05g45820 | Os05g0534500 | - | Detail |
| C2H5g26781 | 5:22,216,968-22,222,503 | - | C1H5g03368 | CX5g039192 | LOC_Os05g45830 | Os05g0534600 | - | Detail |
| C2H5g01370 | 5:22,224,945-22,230,054 | + | C1H5g18942 | CX5g040022 | LOC_Os05g45840 | Os05g0534800 | - | Detail |
| C2H5g21069 | 5:22,231,206-22,233,860 | + | C1H5g12782 | CX5g037833 | LOC_Os05g45850 | Os05g0534900 | - | Detail |
| C2H5g29794 | 5:22,237,286-22,240,510 | - | C1H5g14563 | CX5g037747 | LOC_Os05g45860 | Os05g0535100 | - | Detail |
| C2H5g19676 | 5:22,242,023-22,242,482 | + | C1H5g01171 | - | - | - | - | Detail |
| C2H5g22490 | 5:22,243,519-22,244,341 | - | C1H5g05296 | CX5g040472 | LOC_Os01g52020 | Os07g0631500 | - | Detail |
| C2H5g10427 | 5:22,244,622-22,246,760 | + | C1H5g29728 | CX5g038811 | LOC_Os05g45870 | Os05g0535200 | - | Detail |
| C2H5g08565 | 5:22,249,637-22,250,592 | + | C1H5g30804 | CX5g038750 | LOC_Os05g45870 | Os05g0535300 | - | Detail |
| C2H5g18762 | 5:22,252,723-22,254,144 | - | - | - | - | - | - | Detail |
| C2H5g02857 | 5:22,255,846-22,261,277 | - | - | - | - | - | - | Detail |
| C2H5g19368 | 5:22,263,889-22,267,361 | + | C1H5g31590 | CX5g037476 | LOC_Os05g45880 | Os05g0535400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000200 | 1:23,829,787-23,830,011 | + | C1H1g18988 | - | - | - | - | Detail |
| CX1g004786 | 1:23,832,570-23,832,902 | + | - | - | - | - | - | Detail |
| CX1g002002 | 1:23,835,416-23,839,264 | + | C1H1g31021 | C2H1g08798 | LOC_Os01g46840 | Os01g0656900 | - | Detail |
| CX1g004768 | 1:23,840,181-23,842,254 | + | C1H1g21539 | C2H1g22347 | LOC_Os01g46850 | Os01g0657000 | - | Detail |
| CX1g000538 | 1:23,842,963-23,844,492 | - | C1H1g07661 | C2H1g08096 | LOC_Os01g46860 | Os01g0657100 | PT11, OsPT11, PHT1-11, OsPht1;11, ORYsa;PHT1;11 | Detail |
| CX1g007069 | 1:23,851,100-23,851,999 | - | C1H1g08851 | C2H1g00754 | LOC_Os01g46870 | Os01g0657400 | - | Detail |
| CX1g000193 | 1:23,882,543-23,885,601 | - | C1H1g13139 | C2H1g24228 | LOC_Os01g46926 | Os01g0819500 | - | Detail |
| CX1g000846 | 1:23,886,705-23,889,997 | - | C1H1g10996 | C2H1g04871 | LOC_Os01g46932 | Os01g0658500 | - | Detail |
| CX1g005848 | 1:23,891,607-23,893,000 | + | C1H1g26752 | C2H1g09647 | LOC_Os01g46940 | Os01g0658600 | - | Detail |
| CX1g001447 | 1:23,893,375-23,896,611 | - | C1H1g21735 | C2H1g29071 | LOC_Os01g46950 | Os01g0658700 | - | Detail |
| CX1g002678 | 1:23,901,880-23,905,047 | - | C1H1g14446 | C2H1g04805 | LOC_Os01g46970 | Os01g0658900 | OSBZ8 | Detail |
| CX1g006783 | 1:23,915,372-23,919,742 | + | C1H1g08063 | C2H1g26234 | LOC_Os01g46980 | Os01g0659200 | OsVHA-E1, GPA8 | Detail |
| CX1g002250 | 1:23,940,362-23,940,538 | - | - | - | - | - | - | Detail |
| CX1g000191 | 1:23,945,332-23,946,222 | + | C1H1g01372 | - | LOC_Os01g47040 | Os01g0659800 | - | Detail |
| CX1g000172 | 1:23,956,664-23,957,899 | + | C1H1g17216 | C2H1g17847 | LOC_Os01g47050 | Os01g0659900 | OsFBK1 | Detail |
| CX1g006313 | 1:23,959,946-23,966,785 | - | C1H1g09346 | C2H1g19011 | LOC_Os01g47080 | Os01g0660300 | OsPK6 | Detail |
| CX1g004522 | 1:23,968,195-23,968,413 | + | - | - | - | - | - | Detail |
| CX1g001099 | 1:23,972,283-23,973,062 | - | C1H1g28789 | C2H1g28481 | LOC_Os01g47100 | Os01g0660500 | - | Detail |
| CX1g001902 | 1:23,979,157-23,979,532 | + | - | - | - | - | - | Detail |
| CX1g006598 | 1:23,981,118-23,982,347 | - | C1H1g31872 | C2H1g26897 | LOC_Os01g47130 | Os01g0660700 | - | Detail |