| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18962 | 5:12,540,821-12,542,672 | - | C1H5g00809 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C2H5g16379 | 5:12,560,833-12,561,348 | + | C1H5g07771 | CX5g040926 | LOC_Os05g25600 | - | - | Detail |
| C2H5g17208 | 5:12,564,172-12,565,033 | + | C1H5g18434 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C2H5g12884 | 5:12,571,540-12,575,563 | - | C1H5g29408 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C2H5g23272 | 5:12,622,131-12,622,888 | + | C1H5g31853 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C2H5g30247 | 5:12,623,482-12,626,593 | + | C1H5g21190 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C2H5g20457 | 5:12,642,054-12,643,214 | + | C1H5g09562 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C2H5g00966 | 5:12,649,272-12,652,168 | + | C1H5g20684 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C2H5g05199 | 5:12,658,867-12,659,098 | - | - | CX5g040463 | - | - | - | Detail |
| C2H5g12832 | 5:12,659,126-12,659,341 | - | C1H5g15138 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C2H5g27944 | 5:12,666,481-12,670,358 | + | C1H5g03510 | - | - | - | - | Detail |
| C2H5g23193 | 5:12,666,616-12,670,222 | - | C1H5g02171 | CX5g037938 | LOC_Os05g25320 | Os05g0475600 | - | Detail |
| C2H5g25840 | 5:12,682,852-12,686,503 | + | C1H5g07569 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C2H5g02562 | 5:12,687,807-12,692,024 | + | C1H5g09336 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C2H5g29319 | 5:12,693,761-12,695,203 | + | C1H5g18365 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g21674 | 5:12,722,634-12,724,518 | + | C1H5g16408 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C2H5g11879 | 5:12,724,950-12,726,343 | + | C1H5g24963 | CX5g039314 | LOC_Os05g25170 | - | - | Detail |
| C2H5g22294 | 5:12,730,462-12,732,138 | + | C1H5g19700 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g05113 | 5:12,732,485-12,735,940 | - | C1H5g26142 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C2H5g27623 | 5:12,768,072-12,770,998 | - | C1H5g16305 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039824 | 5:24,537,889-24,540,399 | + | C1H5g28475 | C2H5g11484 | LOC_Os05g50950 | Os05g0586900 | - | Detail |
| CX5g038144 | 5:24,541,618-24,543,742 | - | C1H5g12900 | C2H5g29430 | LOC_Os05g50960 | Os05g0587000 | - | Detail |
| CX5g038565 | 5:24,545,660-24,550,183 | - | C1H5g28542 | C2H5g22520 | LOC_Os05g50970 | Os05g0587100 | - | Detail |
| CX5g038972 | 5:24,552,959-24,556,830 | + | C1H5g23902 | C2H5g13453 | LOC_Os05g50980 | Os05g0587200 | - | Detail |
| CX5g038756 | 5:24,558,925-24,559,143 | - | - | - | - | - | - | Detail |
| CX5g038828 | 5:24,559,569-24,562,957 | - | C1H5g05422 | C2H5g04498 | LOC_Os05g50990 | Os05g0587300 | - | Detail |
| CX5g039424 | 5:24,573,036-24,575,193 | - | C1H5g00207 | C2H5g26610 | LOC_Os05g51000 | Os05g0587400 | - | Detail |
| CX5g037060 | 5:24,576,724-24,578,455 | - | - | - | - | Os05g0587600 | - | Detail |
| CX5g038264 | 5:24,579,492-24,581,577 | - | C1H5g22939 | C2H5g23551 | LOC_Os05g51020 | Os05g0587700 | - | Detail |
| CX5g040862 | 5:24,588,467-24,591,330 | - | C1H5g10111 | C2H5g16401 | LOC_Os05g51050 | Os05g0588100 | - | Detail |
| CX5g040689 | 5:24,595,897-24,598,151 | - | C1H5g02565 | C2H5g01309 | LOC_Os05g51060 | Os05g0588200 | OsPTD1 | Detail |
| CX5g037056 | 5:24,601,130-24,605,112 | + | C1H5g03972 | C2H5g01521 | LOC_Os05g51070 | Os05g0588300 | - | Detail |
| CX5g037734 | 5:24,606,518-24,606,925 | + | - | - | - | Os05g0210525 | - | Detail |
| CX5g038358 | 5:24,607,937-24,609,243 | - | C1H5g19495 | C2H5g15276 | LOC_Os05g51090 | Os05g0588500 | SWEET5, OsSWEET5 | Detail |
| CX5g037152 | 5:24,616,957-24,623,421 | - | C1H5g07091 | C2H5g12592 | LOC_Os05g51110 | Os05g0588700 | - | Detail |
| CX5g037008 | 5:24,626,339-24,627,928 | - | C1H5g21708 | C2H5g18087 | LOC_Os05g51130 | Os05g0588850 | - | Detail |
| CX5g037581 | 5:24,629,569-24,631,140 | - | C1H5g29117 | C2H5g11157 | LOC_Os05g51130 | Os05g0588900 | - | Detail |
| CX5g037769 | 5:24,634,175-24,637,297 | + | C1H5g25345 | C2H5g00751 | LOC_Os05g51140 | Os05g0589000 | - | Detail |
| CX5g039079 | 5:24,638,646-24,640,940 | + | C1H5g16036 | C2H5g06581 | LOC_Os05g51150 | Os05g0589200 | - | Detail |
| CX5g039463 | 5:24,643,417-24,644,388 | - | C1H5g14286 | C2H5g10509 | LOC_Os05g51160 | Os05g0589400 | - | Detail |