| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19439 | 3:5,154,076-5,156,310 | - | C1H3g14759 | CX3g028056 | LOC_Os03g11300 | Os03g0211500 | - | Detail |
| C2H3g29021 | 3:5,159,543-5,162,129 | + | C1H3g30216 | CX3g029812 | LOC_Os03g11310 | Os03g0211600 | - | Detail |
| C2H3g25607 | 3:5,164,310-5,168,780 | + | C1H3g24821 | CX3g025107 | LOC_Os03g11320 | Os03g0211700 | - | Detail |
| C2H3g25870 | 3:5,169,914-5,175,662 | - | C1H3g09091 | CX3g030071 | LOC_Os03g11330 | Os03g0211800 | OsGAUT21 | Detail |
| C2H3g12697 | 3:5,181,568-5,185,725 | - | C1H3g01352 | CX3g026293 | LOC_Os03g11340 | Os03g0211900 | - | Detail |
| C2H3g29397 | 3:5,188,791-5,190,257 | + | C1H3g14150 | CX3g028521 | LOC_Os03g11350 | Os03g0212000 | - | Detail |
| C2H3g17554 | 3:5,191,141-5,194,582 | + | C1H3g07134 | CX3g031116 | LOC_Os03g11360 | Os03g0212200 | OsIRL7 | Detail |
| C2H3g15476 | 3:5,195,728-5,196,819 | + | C1H3g30805 | CX3g029879 | LOC_Os03g11370 | Os03g0212300 | - | Detail |
| C2H3g29540 | 3:5,198,001-5,201,133 | + | C1H3g22328 | CX3g030201 | LOC_Os03g11380 | Os03g0212400 | - | Detail |
| C2H3g29934 | 3:5,202,747-5,205,979 | + | C1H3g28284 | CX3g029371 | LOC_Os03g11400 | Os03g0212600 | - | Detail |
| C2H3g06331 | 3:5,207,765-5,212,397 | + | C1H3g04782 | CX3g027354 | LOC_Os03g11410 | Os03g0212700 | - | Detail |
| C2H3g05367 | 3:5,214,004-5,220,041 | - | C1H3g09300 | CX3g026591 | LOC_Os03g11420 | Os03g0212800 | Os3BGlu6 | Detail |
| C2H3g18758 | 3:5,227,518-5,231,537 | + | C1H3g26134 | CX3g029450 | LOC_Os03g11440 | Os03g0213100 | - | Detail |
| C2H3g03518 | 3:5,232,233-5,234,590 | + | C1H3g26202 | - | LOC_Os03g11450 | Os03g0213200 | - | Detail |
| C2H3g28632 | 3:5,239,919-5,249,485 | + | C1H3g00805 | CX3g027674 | LOC_Os03g11460 | Os03g0213300 | - | Detail |
| C2H3g29945 | 3:5,252,688-5,272,438 | - | C1H3g03534 | CX3g025181 | LOC_Os03g11470 | Os03g0213400 | - | Detail |
| C2H3g00399 | 3:5,275,005-5,275,517 | + | C1H3g27429 | CX3g027089 | LOC_Os03g11480 | Os03g0213500 | - | Detail |
| C2H3g08162 | 3:5,277,613-5,280,301 | + | C1H3g11525 | - | LOC_Os03g11490 | Os03g0213600 | - | Detail |
| C2H3g20966 | 3:5,286,538-5,291,650 | - | C1H3g09548 | CX3g025219 | LOC_Os03g11500 | Os03g0213700 | - | Detail |
| C2H3g14083 | 3:5,292,391-5,295,756 | - | C1H3g26492 | CX3g031080 | LOC_Os03g11510 | Os03g0213800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040625 | 5:24,399,824-24,400,985 | + | C1H5g25754 | C2H5g06430 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| CX5g038552 | 5:24,403,273-24,403,843 | - | C1H5g23722 | C2H5g22409 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| CX5g037414 | 5:24,405,038-24,405,784 | + | C1H5g29939 | C2H5g01350 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| CX5g040723 | 5:24,411,175-24,412,130 | - | C1H5g06457 | C2H5g11315 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| CX5g037383 | 5:24,417,241-24,422,368 | - | C1H5g14305 | C2H5g01570 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| CX5g038892 | 5:24,439,984-24,440,133 | + | - | - | - | - | - | Detail |
| CX5g039086 | 5:24,449,746-24,451,625 | + | C1H5g05102 | C2H5g08711 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| CX5g036814 | 5:24,458,964-24,461,290 | + | C1H5g03901 | C2H5g19125 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| CX5g039624 | 5:24,462,225-24,465,518 | - | C1H5g16468 | C2H5g30392 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| CX5g039076 | 5:24,471,382-24,473,988 | - | C1H5g12424 | C2H5g10246 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| CX5g037455 | 5:24,476,167-24,476,445 | + | C1H5g23505 | C2H5g14116 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| CX5g037322 | 5:24,477,475-24,479,550 | + | C1H5g08867 | C2H5g21671 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| CX5g039391 | 5:24,480,122-24,484,383 | - | C1H5g02224 | C2H5g07511 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| CX5g037391 | 5:24,509,036-24,511,770 | + | C1H5g05725 | C2H5g12537 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| CX5g040329 | 5:24,514,756-24,516,895 | - | C1H5g23433 | C2H5g22033 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| CX5g037684 | 5:24,520,952-24,524,166 | + | C1H5g03676 | C2H5g28495 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| CX5g037746 | 5:24,528,031-24,530,721 | + | C1H5g31726 | C2H5g17335 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| CX5g037636 | 5:24,531,666-24,533,592 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50930 | Os05g0586600 | OsSIG5 | Detail |
| CX5g038653 | 5:24,534,803-24,535,891 | - | - | - | - | Os05g0586800 | - | Detail |
| CX5g037240 | 5:24,535,056-24,536,054 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50940 | Os05g0586700 | - | Detail |