| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g16607 | 2:7,830,052-7,830,681 | - | C1H2g09152 | CX2g020098 | LOC_Os02g15080 | Os02g0178600 | - | Detail |
| C2H2g25041 | 2:7,832,293-7,834,091 | - | C1H2g03589 | CX2g019611 | LOC_Os02g15070 | Os02g0248800 | - | Detail |
| C2H2g29377 | 2:7,839,932-7,841,746 | - | C1H2g22435 | CX2g019611 | LOC_Os02g15090 | Os02g0249000 | GLUD1, GluD1, GluD-1, OsEnS-33 | Detail |
| C2H2g29796 | 2:7,865,918-7,867,304 | + | C1H2g14225 | CX2g024165 | LOC_Os02g15140 | Os02g0249500 | - | Detail |
| C2H2g27895 | 2:7,886,184-7,888,058 | - | C1H2g31875 | CX2g020506 | LOC_Os02g15160 | Os02g0249700 | - | Detail |
| C2H2g30056 | 2:7,894,512-7,896,331 | - | C1H2g23896 | CX2g019611 | LOC_Os02g15178 | Os02g0249800 | - | Detail |
| C2H2g20324 | 2:7,899,981-7,901,800 | + | C1H2g23896 | CX2g019611 | LOC_Os02g15169 | Os02g0249900 | - | Detail |
| C2H2g17924 | 2:7,915,114-7,922,971 | + | C1H2g06356 | CX2g022131 | LOC_Os02g15220 | Os02g0250300 | OsGTE4 | Detail |
| C2H2g13396 | 2:7,925,910-7,929,407 | + | C1H2g12357 | CX2g022354 | LOC_Os02g15230 | Os02g0250400 | BS1, OsGELP33 | Detail |
| C2H2g03256 | 2:7,950,129-7,954,907 | - | C1H2g07509 | CX2g022128 | - | - | - | Detail |
| C2H2g19821 | 2:7,954,163-7,956,556 | + | C1H2g16469 | CX2g023206 | LOC_Os02g15270 | Os02g0251700 | - | Detail |
| C2H2g27477 | 2:7,970,037-7,974,400 | - | C1H2g12332 | CX2g020535 | LOC_Os02g15310 | Os02g0252100 | OsSCL30a | Detail |
| C2H2g02364 | 2:7,993,735-7,995,144 | + | C1H2g26833 | CX2g021498 | LOC_Os02g15340 | Os02g0252200 | - | Detail |
| C2H2g11974 | 2:8,000,199-8,001,344 | - | C1H2g16698 | CX2g020199 | LOC_Os02g15350 | Os02g0252400 | RPBF, OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3 | Detail |
| C2H2g21408 | 2:8,009,303-8,011,587 | - | C1H2g12137 | CX2g021836 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| C2H2g09029 | 2:8,020,214-8,020,899 | - | C1H2g12137 | CX2g021836 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| C2H2g22380 | 2:8,030,648-8,032,504 | - | C1H2g17825 | CX2g024046 | LOC_Os02g15520 | Os02g0254550 | - | Detail |
| C2H2g23473 | 2:8,044,581-8,045,009 | - | C1H2g01415 | CX2g020061 | LOC_Os02g15540 | Os02g0254600 | - | Detail |
| C2H2g25388 | 2:8,061,562-8,065,848 | - | C1H2g02874 | CX2g023976 | LOC_Os02g15550 | Os02g0254700 | - | Detail |
| C2H2g17278 | 2:8,079,081-8,088,006 | - | C1H2g18691 | CX2g021174 | LOC_Os02g15580 | Os02g0255000 | OsCNGC1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040625 | 5:24,399,824-24,400,985 | + | C1H5g25754 | C2H5g06430 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| CX5g038552 | 5:24,403,273-24,403,843 | - | C1H5g23722 | C2H5g22409 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| CX5g037414 | 5:24,405,038-24,405,784 | + | C1H5g29939 | C2H5g01350 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| CX5g040723 | 5:24,411,175-24,412,130 | - | C1H5g06457 | C2H5g11315 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| CX5g037383 | 5:24,417,241-24,422,368 | - | C1H5g14305 | C2H5g01570 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| CX5g038892 | 5:24,439,984-24,440,133 | + | - | - | - | - | - | Detail |
| CX5g039086 | 5:24,449,746-24,451,625 | + | C1H5g05102 | C2H5g08711 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| CX5g036814 | 5:24,458,964-24,461,290 | + | C1H5g03901 | C2H5g19125 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| CX5g039624 | 5:24,462,225-24,465,518 | - | C1H5g16468 | C2H5g30392 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| CX5g039076 | 5:24,471,382-24,473,988 | - | C1H5g12424 | C2H5g10246 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| CX5g037455 | 5:24,476,167-24,476,445 | + | C1H5g23505 | C2H5g14116 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| CX5g037322 | 5:24,477,475-24,479,550 | + | C1H5g08867 | C2H5g21671 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| CX5g039391 | 5:24,480,122-24,484,383 | - | C1H5g02224 | C2H5g07511 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| CX5g037391 | 5:24,509,036-24,511,770 | + | C1H5g05725 | C2H5g12537 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| CX5g040329 | 5:24,514,756-24,516,895 | - | C1H5g23433 | C2H5g22033 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| CX5g037684 | 5:24,520,952-24,524,166 | + | C1H5g03676 | C2H5g28495 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| CX5g037746 | 5:24,528,031-24,530,721 | + | C1H5g31726 | C2H5g17335 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| CX5g037636 | 5:24,531,666-24,533,592 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50930 | Os05g0586600 | OsSIG5 | Detail |
| CX5g038653 | 5:24,534,803-24,535,891 | - | - | - | - | Os05g0586800 | - | Detail |
| CX5g037240 | 5:24,535,056-24,536,054 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50940 | Os05g0586700 | - | Detail |