| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g10075 | 1:27,790,458-27,793,541 | - | C1H1g26513 | CX1g003512 | LOC_Os01g54270 | Os01g0746400 | D10, OsCCD8b | Detail |
| C2H1g08944 | 1:27,811,696-27,814,174 | - | C1H1g04927 | CX1g001601 | LOC_Os01g54300 | Os01g0746700 | - | Detail |
| C2H1g16072 | 1:27,832,688-27,834,827 | + | C1H1g05817 | CX1g000931 | LOC_Os01g54340 | Os01g0747300 | OsDUF50601 | Detail |
| C2H1g03253 | 1:27,835,395-27,839,602 | - | C1H1g29529 | CX1g000909 | LOC_Os01g54350 | Os01g0747400 | - | Detail |
| C2H1g29509 | 1:27,846,120-27,846,374 | + | C1H1g03442 | CX1g001041 | LOC_Os01g54370 | Os01g0747500 | - | Detail |
| C2H1g12337 | 1:27,846,517-27,848,583 | + | C1H1g29128 | CX1g001041 | LOC_Os01g54370 | Os01g0747500 | - | Detail |
| C2H1g09835 | 1:27,850,446-27,853,658 | + | C1H1g26168 | - | LOC_Os01g54390 | Os01g0747700 | - | Detail |
| C2H1g00231 | 1:27,870,985-27,875,485 | - | C1H1g06355 | CX1g000918 | LOC_Os01g54420 | Os01g0748000 | - | Detail |
| C2H1g24369 | 1:27,876,610-27,879,939 | - | C1H1g19852 | CX1g001202 | - | Os01g0748100 | - | Detail |
| C2H1g28384 | 1:27,882,010-27,882,794 | - | C1H1g12110 | CX1g001852 | LOC_Os01g54430 | Os01g0748150 | - | Detail |
| C2H1g16377 | 1:27,887,932-27,888,363 | - | C1H1g06433 | CX1g005907 | LOC_Os01g54450 | Os01g0748300 | - | Detail |
| C2H1g07802 | 1:27,888,462-27,890,181 | + | C1H1g03873 | - | - | - | - | Detail |
| C2H1g01977 | 1:27,892,083-27,893,028 | - | C1H1g15001 | - | LOC_Os01g54460 | - | - | Detail |
| C2H1g21805 | 1:27,897,280-27,897,520 | + | C1H2g13738 | - | - | - | - | Detail |
| C2H1g14948 | 1:27,897,536-27,897,769 | + | - | - | - | - | - | Detail |
| C2H1g03618 | 1:27,900,352-27,901,893 | + | C1H1g03729 | CX1g003919 | LOC_Os01g54470 | Os01g0748500 | - | Detail |
| C2H1g11065 | 1:27,902,173-27,905,933 | - | C1H1g31289 | CX1g002998 | LOC_Os01g54480 | Os01g0748600 | - | Detail |
| C2H1g14520 | 1:27,912,372-27,913,204 | + | C1H1g13303 | CX1g002746 | LOC_Os01g54490 | Os01g0218500 | - | Detail |
| C2H1g25503 | 1:27,919,876-27,920,238 | + | C1H1g07195 | CX1g002648 | - | - | - | Detail |
| C2H1g05314 | 1:27,920,572-27,924,133 | + | C1H1g04026 | CX1g006043 | LOC_Os01g54510 | Os01g0748900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040625 | 5:24,399,824-24,400,985 | + | C1H5g25754 | C2H5g06430 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| CX5g038552 | 5:24,403,273-24,403,843 | - | C1H5g23722 | C2H5g22409 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| CX5g037414 | 5:24,405,038-24,405,784 | + | C1H5g29939 | C2H5g01350 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| CX5g040723 | 5:24,411,175-24,412,130 | - | C1H5g06457 | C2H5g11315 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| CX5g037383 | 5:24,417,241-24,422,368 | - | C1H5g14305 | C2H5g01570 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| CX5g038892 | 5:24,439,984-24,440,133 | + | - | - | - | - | - | Detail |
| CX5g039086 | 5:24,449,746-24,451,625 | + | C1H5g05102 | C2H5g08711 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| CX5g036814 | 5:24,458,964-24,461,290 | + | C1H5g03901 | C2H5g19125 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| CX5g039624 | 5:24,462,225-24,465,518 | - | C1H5g16468 | C2H5g30392 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| CX5g039076 | 5:24,471,382-24,473,988 | - | C1H5g12424 | C2H5g10246 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| CX5g037455 | 5:24,476,167-24,476,445 | + | C1H5g23505 | C2H5g14116 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| CX5g037322 | 5:24,477,475-24,479,550 | + | C1H5g08867 | C2H5g21671 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| CX5g039391 | 5:24,480,122-24,484,383 | - | C1H5g02224 | C2H5g07511 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| CX5g037391 | 5:24,509,036-24,511,770 | + | C1H5g05725 | C2H5g12537 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| CX5g040329 | 5:24,514,756-24,516,895 | - | C1H5g23433 | C2H5g22033 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| CX5g037684 | 5:24,520,952-24,524,166 | + | C1H5g03676 | C2H5g28495 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| CX5g037746 | 5:24,528,031-24,530,721 | + | C1H5g31726 | C2H5g17335 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| CX5g037636 | 5:24,531,666-24,533,592 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50930 | Os05g0586600 | OsSIG5 | Detail |
| CX5g038653 | 5:24,534,803-24,535,891 | - | - | - | - | Os05g0586800 | - | Detail |
| CX5g037240 | 5:24,535,056-24,536,054 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50940 | Os05g0586700 | - | Detail |