| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g02408 | 7:18,338,286-18,339,726 | - | C1H7g24240 | CX7g046762 | LOC_Os07g37310 | Os07g0559400 | - | Detail |
| C2H7g23652 | 7:18,344,714-18,347,709 | - | C1H7g05546 | CX7g047864 | LOC_Os07g37320 | Os07g0559700 | OsMST6 | Detail |
| C2H7g28451 | 7:18,357,907-18,359,959 | - | C1H7g14410 | CX7g049196 | LOC_Os07g37350 | Os07g0560300 | - | Detail |
| C2H7g24349 | 7:18,393,438-18,394,167 | - | C1H7g13147 | CX7g047772 | LOC_Os07g37400 | Os07g0561300 | OsMsr9 | Detail |
| C2H7g19723 | 7:18,428,151-18,429,794 | + | C1H7g00020 | CX7g048428 | LOC_Os07g37530 | Os07g0562400 | - | Detail |
| C2H7g07213 | 7:18,436,325-18,437,499 | + | C1H7g04641 | CX7g048575 | LOC_Os07g37550 | Os07g0562700 | - | Detail |
| C2H7g18218 | 7:18,437,634-18,447,253 | - | C1H7g12956 | CX7g047031 | LOC_Os07g37560 | Os07g0562800 | OsMyoVIIIA-1, OsMyoVIIIA | Detail |
| C2H7g19305 | 7:18,455,239-18,459,715 | + | C1H7g14825 | CX7g046667 | LOC_Os07g37570 | Os07g0562900 | - | Detail |
| C2H7g20529 | 7:18,462,308-18,468,192 | + | C1H7g07200 | CX7g046847 | LOC_Os07g37580 | Os07g0563000 | - | Detail |
| C2H7g14190 | 7:18,481,199-18,489,123 | + | C1H7g08304 | CX7g046078 | LOC_Os07g37610 | Os07g0563300 | GD1 | Detail |
| C2H7g10859 | 7:18,490,045-18,491,136 | - | C1H7g02927 | CX7g049735 | LOC_Os07g37620 | Os07g0563400 | - | Detail |
| C2H7g10783 | 7:18,500,895-18,504,791 | + | C1H7g17571 | CX7g049885 | LOC_Os07g37630 | Os07g0563600 | - | Detail |
| C2H7g20820 | 7:18,505,350-18,509,077 | - | C1H7g28725 | CX7g047703 | LOC_Os07g34550 | Os08g0496700 | - | Detail |
| C2H7g05737 | 7:18,510,107-18,513,304 | + | - | CX7g047679 | - | - | - | Detail |
| C2H7g21099 | 7:18,513,521-18,518,831 | + | C1H7g31085 | CX7g049164 | LOC_Os07g37640 | Os07g0563700 | CUR1 | Detail |
| C2H7g14938 | 7:18,519,961-18,525,797 | - | C1H7g03538 | CX7g049943 | LOC_Os07g37650 | Os07g0563800 | - | Detail |
| C2H7g27663 | 7:18,529,765-18,533,509 | + | C1H7g29522 | CX7g047847 | LOC_Os07g37680 | Os07g0564000 | - | Detail |
| C2H7g06233 | 7:18,555,885-18,557,802 | + | C1H7g30157 | CX7g050409 | LOC_Os07g37730 | Os07g0564500 | - | Detail |
| C2H7g16795 | 7:18,560,062-18,564,107 | - | C1H7g14548 | CX7g047984 | LOC_Os07g37740 | Os07g0564600 | - | Detail |
| C2H7g08551 | 7:18,566,510-18,577,574 | - | C1H7g21741 | CX7g049691 | LOC_Os07g37750 | Os07g0564700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040625 | 5:24,399,824-24,400,985 | + | C1H5g25754 | C2H5g06430 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| CX5g038552 | 5:24,403,273-24,403,843 | - | C1H5g23722 | C2H5g22409 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| CX5g037414 | 5:24,405,038-24,405,784 | + | C1H5g29939 | C2H5g01350 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| CX5g040723 | 5:24,411,175-24,412,130 | - | C1H5g06457 | C2H5g11315 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| CX5g037383 | 5:24,417,241-24,422,368 | - | C1H5g14305 | C2H5g01570 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| CX5g038892 | 5:24,439,984-24,440,133 | + | - | - | - | - | - | Detail |
| CX5g039086 | 5:24,449,746-24,451,625 | + | C1H5g05102 | C2H5g08711 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| CX5g036814 | 5:24,458,964-24,461,290 | + | C1H5g03901 | C2H5g19125 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| CX5g039624 | 5:24,462,225-24,465,518 | - | C1H5g16468 | C2H5g30392 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| CX5g039076 | 5:24,471,382-24,473,988 | - | C1H5g12424 | C2H5g10246 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| CX5g037455 | 5:24,476,167-24,476,445 | + | C1H5g23505 | C2H5g14116 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| CX5g037322 | 5:24,477,475-24,479,550 | + | C1H5g08867 | C2H5g21671 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| CX5g039391 | 5:24,480,122-24,484,383 | - | C1H5g02224 | C2H5g07511 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| CX5g037391 | 5:24,509,036-24,511,770 | + | C1H5g05725 | C2H5g12537 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| CX5g040329 | 5:24,514,756-24,516,895 | - | C1H5g23433 | C2H5g22033 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| CX5g037684 | 5:24,520,952-24,524,166 | + | C1H5g03676 | C2H5g28495 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| CX5g037746 | 5:24,528,031-24,530,721 | + | C1H5g31726 | C2H5g17335 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| CX5g037636 | 5:24,531,666-24,533,592 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50930 | Os05g0586600 | OsSIG5 | Detail |
| CX5g038653 | 5:24,534,803-24,535,891 | - | - | - | - | Os05g0586800 | - | Detail |
| CX5g037240 | 5:24,535,056-24,536,054 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50940 | Os05g0586700 | - | Detail |