| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19252 | 4:17,768,613-17,772,567 | + | C2H4g25683 | CX4g031791 | LOC_Os04g33770 | Os04g0414000 | - | Detail |
| C1H4g03882 | 4:17,775,557-17,780,688 | + | C2H4g24793 | CX4g033946 | LOC_Os04g33780 | Os04g0414100 | - | Detail |
| C1H4g02836 | 4:17,788,330-17,788,518 | + | C2H4g26864 | CX4g034105 | LOC_Os04g33810 | Os04g0414300 | - | Detail |
| C1H4g11612 | 4:17,798,039-17,799,284 | + | C2H4g04832 | CX4g031478 | LOC_Os04g33830 | Os04g0414700 | - | Detail |
| C1H4g11357 | 4:17,810,474-17,811,066 | - | C2H4g14107 | CX4g032373 | - | - | - | Detail |
| C1H4g00507 | 4:17,819,909-17,820,929 | + | C2H4g14689 | CX4g034163 | LOC_Os04g33870 | Os04g0415100 | - | Detail |
| C1H4g11437 | 4:17,826,583-17,828,415 | + | C2H4g24946 | CX4g033864 | LOC_Os04g33880 | Os04g0415200 | - | Detail |
| C1H4g17536 | 4:17,843,911-17,844,690 | + | C2H4g19861 | CX4g032762 | LOC_Os04g33920 | Os04g0415800 | - | Detail |
| C1H4g29189 | 4:17,847,864-17,848,693 | + | C2H4g09747 | CX4g034185 | LOC_Os04g33930 | Os04g0415800 | - | Detail |
| C1H4g07179 | 4:17,850,518-17,851,253 | + | C2H4g16694 | CX4g035734 | LOC_Os04g33940 | Os04g0416000 | - | Detail |
| C1H4g19958 | 4:17,851,549-17,856,940 | - | C2H4g00223 | CX4g035193 | LOC_Os04g33950 | Os04g0416100 | OsE2Fa-3 | Detail |
| C1H4g19221 | 4:17,862,342-17,864,251 | + | C2H4g02278 | CX4g036299 | LOC_Os04g33970 | Os04g0416400 | - | Detail |
| C1H4g02442 | 4:17,865,319-17,865,861 | + | C2H4g08743 | CX4g036299 | LOC_Os04g33970 | - | - | Detail |
| C1H4g24309 | 4:17,871,274-17,874,919 | + | C2H4g02387 | CX4g035969 | LOC_Os04g33980 | Os04g0416500 | - | Detail |
| C1H4g25538 | 4:17,882,422-17,883,594 | - | C2H4g26517 | CX4g032955 | LOC_Os04g33990 | Os04g0416700 | - | Detail |
| C1H4g18396 | 4:17,885,347-17,888,786 | + | C2H4g30043 | CX4g034560 | - | - | - | Detail |
| C1H4g22240 | 4:17,891,018-17,898,096 | + | C2H4g21787 | CX4g036482 | LOC_Os04g34000 | Os04g0416900 | - | Detail |
| C1H4g22652 | 4:17,897,043-17,900,135 | - | C2H4g11943 | CX4g032874 | LOC_Os04g34010 | Os04g0417000 | - | Detail |
| C1H4g23500 | 4:17,938,830-17,943,823 | - | C2H4g20144 | CX4g031544 | LOC_Os04g34080 | Os04g0417800 | - | Detail |
| C1H4g21415 | 4:17,952,251-17,955,550 | + | C2H4g01329 | CX4g032049 | LOC_Os04g34100 | Os04g0418000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040625 | 5:24,399,824-24,400,985 | + | C1H5g25754 | C2H5g06430 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| CX5g038552 | 5:24,403,273-24,403,843 | - | C1H5g23722 | C2H5g22409 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| CX5g037414 | 5:24,405,038-24,405,784 | + | C1H5g29939 | C2H5g01350 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| CX5g040723 | 5:24,411,175-24,412,130 | - | C1H5g06457 | C2H5g11315 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| CX5g037383 | 5:24,417,241-24,422,368 | - | C1H5g14305 | C2H5g01570 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| CX5g038892 | 5:24,439,984-24,440,133 | + | - | - | - | - | - | Detail |
| CX5g039086 | 5:24,449,746-24,451,625 | + | C1H5g05102 | C2H5g08711 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| CX5g036814 | 5:24,458,964-24,461,290 | + | C1H5g03901 | C2H5g19125 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| CX5g039624 | 5:24,462,225-24,465,518 | - | C1H5g16468 | C2H5g30392 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| CX5g039076 | 5:24,471,382-24,473,988 | - | C1H5g12424 | C2H5g10246 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| CX5g037455 | 5:24,476,167-24,476,445 | + | C1H5g23505 | C2H5g14116 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| CX5g037322 | 5:24,477,475-24,479,550 | + | C1H5g08867 | C2H5g21671 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| CX5g039391 | 5:24,480,122-24,484,383 | - | C1H5g02224 | C2H5g07511 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| CX5g037391 | 5:24,509,036-24,511,770 | + | C1H5g05725 | C2H5g12537 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| CX5g040329 | 5:24,514,756-24,516,895 | - | C1H5g23433 | C2H5g22033 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| CX5g037684 | 5:24,520,952-24,524,166 | + | C1H5g03676 | C2H5g28495 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| CX5g037746 | 5:24,528,031-24,530,721 | + | C1H5g31726 | C2H5g17335 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| CX5g037636 | 5:24,531,666-24,533,592 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50930 | Os05g0586600 | OsSIG5 | Detail |
| CX5g038653 | 5:24,534,803-24,535,891 | - | - | - | - | Os05g0586800 | - | Detail |
| CX5g037240 | 5:24,535,056-24,536,054 | + | C1H5g23972 | C2H5g13829 | LOC_Os05g50940 | Os05g0586700 | - | Detail |