| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21742 | 12:7,953,738-7,957,203 | - | C1H12g23481 | CX12g016666 | LOC_Os12g16250 | Os12g0263600 | - | Detail |
| C2H12g09837 | 12:7,965,840-7,966,673 | - | C1H12g19638 | CX12g016756 | - | - | - | Detail |
| C2H12g28081 | 12:7,968,856-7,969,194 | + | - | CX12g018545 | LOC_Os02g35120 | Os06g0629362 | - | Detail |
| C2H12g05917 | 12:7,982,822-7,985,891 | - | C1H12g31185 | CX12g016907 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| C2H12g24177 | 12:7,993,537-7,994,355 | - | C1H12g05455 | CX12g018590 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g24213 | 12:7,994,387-7,995,226 | - | C1H12g12669 | CX12g016989 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g15577 | 12:8,037,335-8,039,673 | + | C1H12g30337 | CX12g015656 | - | - | - | Detail |
| C2H12g13855 | 12:8,065,465-8,065,944 | - | - | CX12g015139 | - | - | - | Detail |
| C2H12g13804 | 12:8,066,709-8,067,195 | + | C1H12g12690 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C2H12g25263 | 12:8,070,111-8,081,634 | + | C1H12g04576 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C2H12g29205 | 12:8,085,928-8,086,371 | + | C1H12g26358 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C2H12g22341 | 12:8,096,868-8,097,109 | + | C1H12g24303 | CX12g017950 | LOC_Os12g16370 | - | - | Detail |
| C2H12g01086 | 12:8,101,650-8,104,551 | + | C1H12g20439 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C2H12g04535 | 12:8,117,029-8,118,986 | - | C1H12g24834 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C2H12g04709 | 12:8,195,949-8,200,053 | - | C1H12g27646 | CX12g016443 | LOC_Os12g17070 | Os12g0270100 | - | Detail |
| C2H12g27718 | 12:8,205,451-8,207,208 | + | C1H12g23758 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C2H12g03089 | 12:8,213,300-8,218,084 | - | C1H12g00865 | CX12g016852 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g11132 | 12:8,238,815-8,241,615 | - | C1H12g07805 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g14706 | 12:8,247,114-8,250,863 | - | C1H12g17449 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| C2H12g04129 | 12:8,266,886-8,267,263 | - | - | CX12g018058 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037923 | 5:24,295,552-24,296,373 | + | C1H5g06864 | C2H5g17272 | LOC_Os05g50470 | Os05g0581700 | - | Detail |
| CX5g036898 | 5:24,299,610-24,299,831 | - | - | - | - | - | - | Detail |
| CX5g037805 | 5:24,301,208-24,309,151 | + | C1H5g11608 | C2H5g15909 | LOC_Os05g50480 | Os05g0581800 | - | Detail |
| CX5g040560 | 5:24,311,737-24,312,845 | - | C1H5g02099 | C2H5g13600 | LOC_Os05g50490 | Os05g0581900 | - | Detail |
| CX5g037615 | 5:24,318,649-24,319,551 | - | C1H5g24313 | C2H5g26948 | LOC_Os05g50500 | Os05g0582000 | - | Detail |
| CX5g037117 | 5:24,321,453-24,326,486 | - | C1H5g00717 | C2H5g11127 | LOC_Os05g50510 | Os05g0582100 | - | Detail |
| CX5g040852 | 5:24,331,479-24,334,235 | + | C1H5g14623 | C2H5g24114 | LOC_Os05g50550 | Os05g0582300 | OsSPS2 | Detail |
| CX5g040192 | 5:24,336,364-24,336,984 | + | C1H5g08047 | - | - | Os05g0582400 | - | Detail |
| CX5g037924 | 5:24,337,333-24,342,002 | + | C1H5g08047 | C2H5g18684 | LOC_Os05g50560 | Os05g0143500 | - | Detail |
| CX5g036920 | 5:24,342,963-24,344,282 | + | C1H5g30800 | C2H5g28002 | LOC_Os05g50570 | Os05g0582500 | - | Detail |
| CX5g038472 | 5:24,347,041-24,348,396 | + | C1H5g18687 | C2H5g18541 | LOC_Os05g50580 | Os05g0582600 | - | Detail |
| CX5g036839 | 5:24,350,026-24,351,354 | + | C1H5g25143 | C2H5g00525 | LOC_Os05g50600 | Os05g0582800 | - | Detail |
| CX5g039759 | 5:24,353,627-24,355,533 | - | C1H5g31178 | C2H5g09834 | LOC_Os05g50610 | Os05g0583000 | - | Detail |
| CX5g039709 | 5:24,359,449-24,359,613 | - | - | - | - | - | - | Detail |
| CX5g039128 | 5:24,363,626-24,365,794 | + | C1H5g13626 | C2H5g27671 | LOC_Os05g50624 | Os05g0583100 | - | Detail |
| CX5g037059 | 5:24,366,222-24,373,974 | + | C1H5g29188 | C2H5g14974 | LOC_Os05g50640 | Os05g0583200 | - | Detail |
| CX5g038734 | 5:24,375,222-24,375,482 | + | C1H5g12832 | C2H5g15690 | LOC_Os05g50654 | Os05g0583400 | - | Detail |
| CX5g040394 | 5:24,378,415-24,385,855 | + | C1H5g11375 | C2H5g21298 | LOC_Os05g50660 | Os05g0583500 | - | Detail |
| CX5g040044 | 5:24,391,645-24,392,598 | + | C1H5g12339 | C2H5g22702 | LOC_Os05g44090 | Os05g0583600 | - | Detail |
| CX5g040015 | 5:24,395,445-24,397,383 | - | C1H5g13782 | C2H5g01078 | LOC_Os05g50690 | Os05g0583950 | - | Detail |