| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g13429 | 5:2,984,898-2,998,636 | + | C1H5g15255 | CX5g040180 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| C2H5g10674 | 5:3,002,564-3,005,221 | + | C1H5g29215 | CX5g036830 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| C2H5g18018 | 5:3,006,382-3,008,711 | - | C1H5g24999 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C2H5g16806 | 5:3,009,521-3,009,991 | - | C1H5g24999 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C2H5g19257 | 5:3,012,387-3,019,849 | - | C1H5g19191 | CX5g037735 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| C2H5g24095 | 5:3,036,603-3,040,225 | + | C1H5g26427 | CX5g036773 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| C2H5g30095 | 5:3,041,598-3,044,973 | + | C1H5g22506 | CX5g040221 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| C2H5g06168 | 5:3,050,182-3,051,081 | - | C1H5g10936 | CX5g038772 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| C2H5g24726 | 5:3,058,466-3,068,570 | + | C1H5g01032 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C2H5g04837 | 5:3,101,156-3,106,489 | - | C1H5g16939 | CX5g039426 | LOC_Os05g06910 | Os05g0160600 | - | Detail |
| C2H5g14563 | 5:3,107,589-3,110,784 | - | C1H5g08386 | CX5g038917 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| C2H5g12914 | 5:3,120,434-3,125,033 | + | C1H5g11456 | CX5g036690 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| C2H5g20736 | 5:3,134,414-3,138,292 | + | C1H5g17757 | - | LOC_Os05g06890 | Os05g0161200 | OsCRSH1 | Detail |
| C2H5g24812 | 5:3,141,666-3,143,431 | - | - | - | - | - | - | Detail |
| C2H5g07576 | 5:3,143,472-3,148,402 | + | C1H5g28932 | CX5g039426 | LOC_Os05g06910 | Os05g0161400 | - | Detail |
| C2H5g24440 | 5:3,157,934-3,160,415 | + | C1H5g24444 | - | LOC_Os05g06920 | Os05g0161500 | OsCRSH2 | Detail |
| C2H5g21538 | 5:3,178,857-3,181,093 | + | C1H5g10245 | - | LOC_Os05g06940 | Os05g0161800 | OsCRSH3 | Detail |
| C2H5g10505 | 5:3,186,528-3,188,625 | - | C1H5g04552 | CX5g038822 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| C2H5g18624 | 5:3,193,191-3,204,066 | - | C1H5g19592 | CX5g040374 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| C2H5g07564 | 5:3,218,387-3,221,336 | - | C1H5g00882 | CX5g040436 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037412 | 5:24,160,890-24,161,807 | - | C1H5g20150 | C2H5g03748 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| CX5g040349 | 5:24,170,041-24,175,580 | + | C1H5g22642 | C2H5g26536 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| CX5g039590 | 5:24,179,882-24,185,096 | - | C1H5g30673 | C2H5g28332 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| CX5g038128 | 5:24,186,054-24,187,248 | + | C1H5g18644 | C2H5g01414 | - | - | - | Detail |
| CX5g040214 | 5:24,190,995-24,191,312 | - | - | - | - | - | - | Detail |
| CX5g037556 | 5:24,196,501-24,197,425 | + | C1H5g30824 | C2H5g24268 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| CX5g037802 | 5:24,198,513-24,202,879 | - | C1H5g28939 | C2H5g28493 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| CX5g037422 | 5:24,203,497-24,203,769 | - | - | - | LOC_Os04g24770 | - | - | Detail |
| CX5g037992 | 5:24,209,814-24,210,815 | + | C1H5g17437 | C2H5g09709 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| CX5g039421 | 5:24,213,222-24,215,171 | + | C1H5g00625 | C2H5g24355 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| CX5g038909 | 5:24,217,777-24,218,502 | + | C1H5g28773 | C2H5g30078 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| CX5g038520 | 5:24,228,525-24,229,641 | - | C1H8g13275 | C2H5g20837 | - | - | - | Detail |
| CX5g037463 | 5:24,230,809-24,231,396 | - | C1H5g25217 | C2H5g16972 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| CX5g040775 | 5:24,234,004-24,235,902 | - | C1H5g24861 | C2H5g06063 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| CX5g040870 | 5:24,241,776-24,244,499 | + | C1H5g08314 | C2H5g20886 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| CX5g040990 | 5:24,249,510-24,249,659 | + | - | - | - | - | - | Detail |
| CX5g038555 | 5:24,252,912-24,259,653 | + | C1H5g24542 | C2H5g02301 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| CX5g040137 | 5:24,260,874-24,264,249 | - | C1H5g04263 | C2H5g26213 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| CX5g037650 | 5:24,274,703-24,281,787 | + | C1H5g02145 | C2H5g13644 | LOC_Os05g50410 | Os05g0580500 | REC8, OsREC8, OsRad21-4 | Detail |
| CX5g040658 | 5:24,282,865-24,284,922 | + | C1H5g24080 | C2H5g28264 | LOC_Os05g50460 | Os05g0581300 | - | Detail |